Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 U2.21-201ENST00000637295 81 ntBASIC2.96□□□□□ -1.94
LDB1Q86U70 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LDB1Q86U70 MTND5P26-201ENST00000426018 1752 ntBASIC2.96□□□□□ -1.94
LDB1Q86U70 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB1Q86U70 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.95□□□□□ -1.94
LDB1Q86U70 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LDB1Q86U70 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LDB1Q86U70 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
LDB1Q86U70 SNORA71.1-201ENST00000364523 117 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 SNORA4.3-201ENST00000365564 137 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 SNORA9-201ENST00000384215 133 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 Y_RNA.517-201ENST00000384551 106 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 SNORD116-4-201ENST00000384733 96 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 NDUFS5P4-201ENST00000412983 318 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 RPL26P27-201ENST00000414397 437 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 MTATP6P18-201ENST00000417994 673 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 OR2B8P-201ENST00000432841 938 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.95□□□□□ -1.94
LDB1Q86U70 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.95□□□□□ -1.94
LDB1Q86U70 RPL21P8-201ENST00000465083 535 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 SUMO2P6-201ENST00000505273 288 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AP003122.3-201ENST00000526316 255 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AC084851.1-201ENST00000529105 249 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 OR5AL2P-201ENST00000532185 920 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.95□□□□□ -1.94
LDB1Q86U70 MIR4506-201ENST00000584693 77 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AL355598.1-201ENST00000604169 202 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AL022154.1-201ENST00000604698 785 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 MTND4LP5-201ENST00000605152 292 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.95□□□□□ -1.94
LDB1Q86U70 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB1Q86U70 AC139792.2-201ENST00000624218 587 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AL157786.1-207ENST00000627771 695 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 U6.114-201ENST00000636407 96 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AC091564.4-201ENST00000533934 2194 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
LDB1Q86U70 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LDB1Q86U70 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LDB1Q86U70 FAM35CP-201ENST00000554755 2470 ntBASIC2.95□□□□□ -1.94
LDB1Q86U70 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LDB1Q86U70 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LDB1Q86U70 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
LDB1Q86U70 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LDB1Q86U70 RNU6-1120P-201ENST00000362988 108 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 RNU6-778P-201ENST00000363269 103 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 RNA5SP139-201ENST00000364340 117 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 RN7SKP226-201ENST00000364912 300 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 RNU1-73P-201ENST00000383971 164 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 RNU6-1027P-201ENST00000383998 107 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AL365496.1-201ENST00000426885 215 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AC002486.1-201ENST00000435098 391 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AL451074.3-201ENST00000437709 472 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC009969.1-201ENST00000438726 172 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 NANOGNBP1-201ENST00000448444 480 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 RNU7-182P-201ENST00000459009 62 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC126182.1-201ENST00000478134 357 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC091435.1-201ENST00000505442 584 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC114786.4-201ENST00000508771 728 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 RNU1-103P-201ENST00000516502 125 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 RNU6-1315P-201ENST00000517187 99 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LDB1Q86U70 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 FAM92A1P1-201ENST00000528023 890 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.94□□□□□ -1.94
LDB1Q86U70 NACAP3-201ENST00000552100 481 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.94□□□□□ -1.94
LDB1Q86U70 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.94□□□□□ -1.94
LDB1Q86U70 HMGN2P15-201ENST00000585707 270 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC008521.1-201ENST00000587471 187 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC025449.1-201ENST00000603896 529 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AL136363.2-201ENST00000604173 851 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC007684.1-201ENST00000609671 477 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AP001486.3-201ENST00000615334 372 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 AC015540.1-201ENST00000615828 501 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms