Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 U3.22-201ENST00000391120 215 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AL022722.2-201ENST00000402519 180 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 MIR1179-201ENST00000408703 91 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 VN1R36P-201ENST00000414936 291 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RPL23AP82-202ENST00000427528 469 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 HMGB1P18-201ENST00000438801 619 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 TPT1P12-201ENST00000448968 492 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AC010099.1-201ENST00000455434 375 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AC034236.1-201ENST00000469891 373 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RN7SL860P-201ENST00000473738 223 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RPL21P13-201ENST00000488305 481 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 PHBP14-201ENST00000512887 367 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RNU6-1183P-201ENST00000517054 60 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AP000889.2-201ENST00000532684 490 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 RPS3AP23-202ENST00000574601 686 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 MIR4782-201ENST00000577987 79 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AC005261.5-201ENST00000596280 355 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AL670379.10-201ENST00000604330 253 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 APOOP1-201ENST00000604695 592 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AL356218.2-201ENST00000605264 187 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AL670379.9-201ENST00000605428 253 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AC069234.5-201ENST00000611056 416 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 uc_338.15-201ENST00000615470 191 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AL591424.2-201ENST00000617023 128 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 MIR6758-201ENST00000620653 63 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AC140479.6-201ENST00000633535 357 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 U2.21-201ENST00000637295 81 ntBASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TMEM88Q6PEY1 CEP170P1-201ENST00000502249 4587 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 MTND4P29-201ENST00000503122 1372 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AC022336.2-201ENST00000568966 2538 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RPL32P3-201ENST00000359025 275 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RNU6-797P-201ENST00000363101 109 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 SNORA62-201ENST00000365493 153 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RNU6-1013P-201ENST00000384180 107 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 SNORD73A-201ENST00000386062 65 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RNA5SP252-201ENST00000391131 119 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RAP1BP3-201ENST00000407180 549 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RNU2-41P-201ENST00000410991 178 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 SNORA57.3-201ENST00000411095 141 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 ELOCP19-201ENST00000411919 318 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 HSPE1P12-201ENST00000412576 301 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AL627311.1-201ENST00000431514 115 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 MTND3P23-201ENST00000431980 347 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RPL26P9-201ENST00000457466 433 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RPL23AP24-201ENST00000458203 385 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 MTND4P17-201ENST00000470444 350 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 SNORA31.1-201ENST00000515993 133 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 SNORA31.5-201ENST00000516190 133 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 RNU6-703P-201ENST00000516946 107 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AC105029.1-201ENST00000520250 669 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AC005344.1-201ENST00000613391 459 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AC099654.5-201ENST00000636479 350 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 MAPK10-362ENST00000641864 4484 ntBASIC3.17□□□□□ -1.9
TMEM88Q6PEY1 AC073073.2-201ENST00000609827 2578 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-37P-201ENST00000362692 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-11P-201ENST00000364234 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-7-201ENST00000364784 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-8-201ENST00000365467 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 Z98749.2-208ENST00000381646 500 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-25P-201ENST00000383873 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-1-201ENST00000383898 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-48P-201ENST00000384161 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-36P-201ENST00000384172 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-4P-201ENST00000384205 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-5P-201ENST00000384238 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-3P-201ENST00000384314 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-16P-201ENST00000384385 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-15P-201ENST00000384534 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-2-201ENST00000384627 107 ntBASIC3.16□□□□□ -1.9
TMEM88Q6PEY1 RNU6-29P-201ENST00000384637 107 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms