Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SNORA40.3-201ENST00000390964 122 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 RPS24P1-201ENST00000438550 371 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 MTATP6P7-201ENST00000453315 681 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 CLIC4P2-201ENST00000601934 717 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC174048.1-201ENST00000603389 144 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 AC008147.4-201ENST00000617570 1204 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.74□□□□□ -1.97
CASC4Q6P4E1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 MTND4P35-201ENST00000604257 1375 ntBASIC2.74□□□□□ -1.97
CASC4Q6P4E1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AC073343.1-201ENST00000328239 651 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 SNORA4.3-201ENST00000365564 137 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 UBA52P6-201ENST00000399822 382 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AL138827.1-201ENST00000402666 306 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 RNU2-8P-201ENST00000410727 190 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 RNU6-195P-201ENST00000411352 109 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AL592148.1-201ENST00000413568 445 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AL139132.1-201ENST00000431587 344 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AL033528.1-201ENST00000453780 140 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 RNA5SP269-201ENST00000459032 137 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AC011825.1-201ENST00000484967 388 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 RN7SKP40-201ENST00000517211 242 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AC009902.1-201ENST00000519351 183 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AC024619.4-201ENST00000580924 316 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 AC007938.3-201ENST00000604965 623 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.73□□□□□ -1.97
CASC4Q6P4E1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.73□□□□□ -1.97
CASC4Q6P4E1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC010889.1-201ENST00000566193 2666 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 Y_RNA.22-201ENST00000362492 102 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 SNORA68.1-201ENST00000364537 132 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 SNORA20.2-201ENST00000383922 131 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 MIR558-201ENST00000384920 94 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AL513475.1-201ENST00000406602 315 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC127391.1-201ENST00000411737 98 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC114491.1-201ENST00000416095 246 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 RPL23AP30-201ENST00000432419 501 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC112220.1-201ENST00000434628 355 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC009961.2-201ENST00000435771 251 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 DPPA3P1-201ENST00000448050 469 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 HMGN2P10-201ENST00000448085 265 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC109927.2-201ENST00000506416 303 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC021739.1-201ENST00000559631 174 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 CYCSP39-201ENST00000565821 309 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 MIR3167-201ENST00000579623 85 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 OR1M4P-201ENST00000589199 287 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 Z99497.2-201ENST00000603634 310 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 MIR15A-201ENST00000607334 83 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms