Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 HMGB1P41-201ENST00000520234 440 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 EEF1A1P37-201ENST00000522748 715 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AP003122.3-201ENST00000526316 255 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC084851.1-201ENST00000529105 249 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 OR5BN1P-201ENST00000532955 829 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC009094.1-201ENST00000564443 426 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC135628.1-201ENST00000568867 534 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 MIR5092-201ENST00000583139 88 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 MIR4765-201ENST00000585007 77 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC022893.3-201ENST00000607665 437 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC034229.4-201ENST00000607861 441 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 uc_338.14-201ENST00000613162 166 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 PISRT1-201ENST00000626175 531 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 RNU6-859P-201ENST00000362728 107 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 SNORA5B-201ENST00000363786 132 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 SNORA38-201ENST00000363946 132 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 RNU6-960P-201ENST00000364056 120 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 RNU6-190P-201ENST00000384154 102 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AL360182.1-201ENST00000397433 468 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AL356057.3-201ENST00000402607 340 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 RNU2-52P-201ENST00000410680 190 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 MTCO3P30-201ENST00000426425 670 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 ARL5AP4-201ENST00000430731 512 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 MICF-203ENST00000432679 129 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 FABP5P14-201ENST00000437273 393 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 COX6CP12-201ENST00000446748 202 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC092001.1-201ENST00000453012 261 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 ZNF114P1-201ENST00000453500 292 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AL441985.1-201ENST00000457727 251 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AL139824.2-201ENST00000458731 1095 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 RN7SKP287-201ENST00000516546 266 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 RNU7-51P-201ENST00000516560 62 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 RNU6-572P-201ENST00000516724 80 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 SCARNA3-201ENST00000517097 143 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC106782.4-201ENST00000568264 210 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 ROCK1P1-201ENST00000573767 549 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 MIR4658-201ENST00000584344 65 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC008121.1-201ENST00000603244 268 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC093424.1-201ENST00000604999 338 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AL021997.1-201ENST00000605757 193 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 OR2AS2P-201ENST00000606902 342 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC004223.4-201ENST00000612426 332 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC130324.3-201ENST00000614165 542 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 HMGB1P24-202ENST00000615653 685 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC104010.1-201ENST00000616889 150 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 AC131159.1-201ENST00000621854 213 ntBASIC2.35□□□□□ -2.03
NIPAL3Q6P499 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NIPAL3Q6P499 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 TEX21P-201ENST00000447107 1476 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 RNU6-946P-201ENST00000383878 107 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 MRPL42P2-201ENST00000403169 426 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC137499.1-201ENST00000427602 88 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 Z98742.2-201ENST00000431564 187 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC119618.1-201ENST00000434191 222 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC011816.1-201ENST00000441346 546 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 EEF1B2P7-201ENST00000451177 676 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC096725.1-201ENST00000514266 313 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 RNU6-1129P-201ENST00000515964 104 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 RNA5SP356-201ENST00000515972 94 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 RNU6-581P-201ENST00000516214 105 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC025755.1-201ENST00000521306 278 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC010186.2-204ENST00000537668 439 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 MIR5697-201ENST00000578045 78 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC174048.1-201ENST00000603389 144 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 RNU6-87P-201ENST00000607561 108 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC010678.1-201ENST00000614118 713 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms