Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 RNU6-1167P-201ENST00000363227 94 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 RNU1-20P-201ENST00000363314 162 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 SNORA68.2-201ENST00000391263 128 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 RNA5SP397-201ENST00000391323 118 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC087588.1-201ENST00000462203 316 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 RN7SL610P-201ENST00000463845 291 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 RPL23AP45-201ENST00000476406 468 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 HSPE1P6-201ENST00000479457 291 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 SERF1AP1-201ENST00000514575 187 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 MIR4270-201ENST00000581799 70 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC073657.2-201ENST00000605661 303 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC091953.3-201ENST00000623220 236 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC243829.7-201ENST00000633081 225 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 AC009812.4-201ENST00000569134 1805 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF20Q5VTR2 CPHL1P-201ENST00000461341 3407 ntBASIC5.41□□□□□ -1.54
RNF20Q5VTR2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 RNU5A-1-201ENST00000362698 116 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.405-201ENST00000383979 100 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 RNU6-1074P-201ENST00000383995 104 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.451-201ENST00000384200 100 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.524-201ENST00000384564 100 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.561-201ENST00000384694 100 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 RPS29P13-201ENST00000402041 169 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AL133270.1-201ENST00000402635 279 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 LAP3P1-201ENST00000403648 294 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 TMEM167AP1-201ENST00000423409 219 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 RPS12P10-201ENST00000427031 377 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AC079780.1-201ENST00000428259 207 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AL591043.1-201ENST00000432461 424 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 HIGD1AP2-201ENST00000446367 280 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AL162591.2-201ENST00000449634 317 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AC010326.1-201ENST00000462726 602 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AC034236.1-201ENST00000469891 373 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AK3P2-201ENST00000507976 429 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AC107393.1-201ENST00000512403 346 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.703-201ENST00000516846 111 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 RNU6-612P-201ENST00000516909 102 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 RN7SL690P-201ENST00000582087 240 ntBASIC5.4□□□□□ -1.54
RNF20Q5VTR2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RNF20Q5VTR2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF20Q5VTR2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF20Q5VTR2 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.4□□□□□ -1.55
RNF20Q5VTR2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 MFSD8-242ENST00000641690 4199 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 RNU1-108P-201ENST00000362556 161 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 Y_RNA.199-201ENST00000364014 102 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 RNA5SP151-201ENST00000365632 117 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 RNU1-63P-201ENST00000383902 164 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 RNU6-125P-201ENST00000384505 107 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 SNORA12.2-201ENST00000391040 156 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 RPL23AP93-201ENST00000440847 484 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC079354.2-201ENST00000453523 154 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AL136097.1-201ENST00000456945 913 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 RPL7P49-201ENST00000471402 708 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AL121603.1-201ENST00000553815 142 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC051619.2-201ENST00000559063 397 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC022968.1-201ENST00000567372 442 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 HNRNPCP4-201ENST00000571636 900 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 MIR4458-201ENST00000578872 75 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 MIR4480-201ENST00000582492 71 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AP000787.2-201ENST00000604432 568 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AL161798.1-201ENST00000604630 131 ntBASIC5.39□□□□□ -1.55
RNF20Q5VTR2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF20Q5VTR2 AL360181.4-201ENST00000621752 134 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms