Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF38BQ5VTL8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC083843.2-201ENST00000568248 6253 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 RNU6-335P-201ENST00000364563 113 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 RNU6-804P-201ENST00000384286 107 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 MIR124-3-201ENST00000384866 87 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 RNU1-139P-201ENST00000391307 165 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 H2AFZP5-201ENST00000446960 382 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AL451050.1-201ENST00000450126 415 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC073901.1-201ENST00000462471 408 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC087477.1-201ENST00000465747 340 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC105137.1-201ENST00000484355 562 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AL132838.2-201ENST00000492041 314 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 SCARNA22-201ENST00000503991 125 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AP003730.1-201ENST00000524605 285 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AK6P2-201ENST00000549020 471 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC096577.2-201ENST00000611455 153 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 CR381572.2-201ENST00000624852 397 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AL353743.1-202ENST00000431724 1695 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 AC025031.4-201ENST00000621248 3271 ntBASIC5.42□□□□□ -1.54
PRPF38BQ5VTL8 RAD17P1-201ENST00000418130 2042 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AC135776.4-201ENST00000624300 1904 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RNA5SP326-201ENST00000363209 110 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RNU6-923P-201ENST00000364753 107 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 Y_RNA.383-201ENST00000383855 97 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RNU6-1279P-201ENST00000383917 103 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 Y_RNA.418-201ENST00000384029 102 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RPL11P3-201ENST00000395256 523 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 U3.37-201ENST00000408528 213 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 SNRPEP9-201ENST00000436794 238 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RPS5P7-201ENST00000456664 608 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 UQCRHP4-201ENST00000471686 272 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AC117440.1-201ENST00000474107 571 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 SNORA43.2-201ENST00000516652 128 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AC136777.2-201ENST00000522979 358 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AL590240.4-201ENST00000616908 390 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AC039056.2-201ENST00000622261 511 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 IGHVIII-44-202ENST00000636235 289 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 AC093671.1-201ENST00000624981 2929 ntBASIC5.41□□□□□ -1.54
PRPF38BQ5VTL8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 BX322639.1-202ENST00000423987 2213 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 RNU6-1181P-201ENST00000384191 106 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 RNU6-22P-201ENST00000384355 107 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 SNORA48.4-201ENST00000391089 134 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 CRIP1P1-201ENST00000427567 185 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 snoU13.4-201ENST00000458916 104 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 AP001324.2-201ENST00000461163 319 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 AP004607.1-201ENST00000524456 203 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms