Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORD125-201ENST00000459538 96 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 RN7SL189P-201ENST00000468631 289 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 RNU6-1095P-201ENST00000516148 108 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC026421.1-201ENST00000519101 163 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC074050.1-201ENST00000563247 211 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 MIR4724-201ENST00000579485 89 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 RNU6-94P-201ENST00000607728 107 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 SNORA43.4-201ENST00000629559 138 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC000095.2-202ENST00000637415 154 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC074101.1-201ENST00000637861 241 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VARS2Q5ST30 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VARS2Q5ST30 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VARS2Q5ST30 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VARS2Q5ST30 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VARS2Q5ST30 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VARS2Q5ST30 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 RNA5SP305-201ENST00000362665 119 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 SNORA72-201ENST00000384339 132 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 SNORA40C-201ENST00000391285 128 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 RNA5SP487-201ENST00000410186 122 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC021205.2-201ENST00000480069 347 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 ATP5EP1-201ENST00000510257 156 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC093331.1-201ENST00000521474 169 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 AP004607.2-201ENST00000533949 322 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC131055.1-201ENST00000584626 316 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VARS2Q5ST30 AC006206.1-201ENST00000544842 3387 ntBASIC5.77□□□□□ -1.49
VARS2Q5ST30 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.77□□□□□ -1.49
VARS2Q5ST30 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
VARS2Q5ST30 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VARS2Q5ST30 AP005432.1-201ENST00000580891 3485 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 AL353796.1-201ENST00000561542 3241 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 SNORD45.3-201ENST00000363836 72 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 Y_RNA.179-201ENST00000363844 90 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 RNU1-43P-201ENST00000365052 165 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 Y_RNA.549-201ENST00000384657 102 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 MIR137-201ENST00000385223 102 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 RNU6-279P-201ENST00000391297 101 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 AL031274.2-201ENST00000599419 203 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 FAM71BP1-201ENST00000604431 523 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 BX005214.3-202ENST00000619809 325 ntBASIC5.76□□□□□ -1.49
VARS2Q5ST30 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VARS2Q5ST30 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VARS2Q5ST30 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VARS2Q5ST30 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
VARS2Q5ST30 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARS2Q5ST30 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARS2Q5ST30 AC022336.2-201ENST00000568966 2538 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 AC079741.1-201ENST00000321498 212 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 SNORD18B-201ENST00000365659 72 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 SNORA36C-201ENST00000384289 132 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 RNU6-166P-201ENST00000384371 107 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 MT-TC-201ENST00000387405 66 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 AL512633.1-201ENST00000399931 655 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 RNA5SP475-201ENST00000410568 110 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 MTATP8P2-201ENST00000435212 202 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 AL389915.2-201ENST00000454576 441 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 RPL39P34-201ENST00000477141 156 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 RNU6-109P-201ENST00000516364 107 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 RNU6-184P-201ENST00000516514 107 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 RNA5SP54-201ENST00000516951 92 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 GNRHR2P1-201ENST00000555315 631 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 MIR4480-201ENST00000582492 71 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 AP000769.2-201ENST00000602344 396 ntBASIC5.75□□□□□ -1.49
VARS2Q5ST30 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms