Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC38Q502W7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC38Q502W7 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
CCDC38Q502W7 AL161912.2-201ENST00000565707 3007 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 Y_RNA.6-201ENST00000362350 114 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 RNU6-517P-201ENST00000384362 110 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 RPL17P50-201ENST00000396131 546 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 SYF2P2-201ENST00000417620 583 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC38Q502W7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 AL353729.1-201ENST00000425044 720 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC098614.2-201ENST00000426040 255 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 RPL7P54-201ENST00000438336 674 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 FDX1P2-201ENST00000450769 375 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 RPL21P41-201ENST00000459863 264 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC083798.1-201ENST00000472671 131 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 RPS29P20-201ENST00000489592 171 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 RPS27AP10-201ENST00000496103 208 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 SNORA40.12-201ENST00000516329 111 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 Y_RNA.693-201ENST00000516641 110 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AP005435.4-201ENST00000529514 284 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 HMGB1P33-201ENST00000563485 527 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 MIR548AC-201ENST00000585049 88 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC007621.1-201ENST00000604544 437 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AP001596.2-201ENST00000608410 312 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC004832.5-201ENST00000608677 401 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC013562.2-201ENST00000611632 603 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 U4.5-201ENST00000617137 123 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AL354950.2-201ENST00000617939 290 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
CCDC38Q502W7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC38Q502W7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC38Q502W7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC006020.1-201ENST00000420179 1854 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC38Q502W7 CD24P4-201ENST00000382840 243 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 MIR887-201ENST00000401258 79 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 RNA5SP344-201ENST00000411081 104 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AF274854.1-201ENST00000413236 615 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC093151.1-201ENST00000427711 313 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AL353705.1-201ENST00000433468 480 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC38Q502W7 AL118520.1-201ENST00000450770 291 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AL163973.1-201ENST00000484753 577 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC38Q502W7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC38Q502W7 TPRKBP2-201ENST00000565969 475 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 DEFB131E-202ENST00000602581 683 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AL133393.1-201ENST00000603277 287 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC024220.1-201ENST00000603675 484 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AL021997.1-201ENST00000605757 193 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC019176.2-201ENST00000611579 315 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 MIR6075-201ENST00000620782 95 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 ELF2P3-201ENST00000445099 1506 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC008669.1-201ENST00000565823 2178 ntBASIC3.48□□□□□ -1.85
CCDC38Q502W7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CCDC38Q502W7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC38Q502W7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC38Q502W7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC38Q502W7 RNU6-371P-201ENST00000364283 108 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 Y_RNA.255-201ENST00000364581 97 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 Y_RNA.381-201ENST00000365666 102 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 RNU6-658P-201ENST00000384606 106 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 RNU6-903P-201ENST00000391270 109 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 AL139039.1-201ENST00000401900 692 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 Z99755.1-201ENST00000414048 380 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 BPY2DP-201ENST00000422208 265 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 MYL8P-204ENST00000431574 518 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC016691.1-201ENST00000441321 413 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 SNORD105B-201ENST00000458770 79 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 RNU6-261P-201ENST00000459506 102 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC128713.1-201ENST00000471495 306 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC009901.1-201ENST00000506703 541 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 RNU6-572P-201ENST00000516724 80 ntBASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC38Q502W7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms