Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC026585.1-201ENST00000619582 524 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AC091953.2-201ENST00000623979 160 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC96Q2M329 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC96Q2M329 SNORA9.2-201ENST00000365361 133 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 RNU6-1042P-201ENST00000384204 107 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 ELOCP17-201ENST00000414751 326 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 MTND3P17-201ENST00000416968 344 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC009414.1-201ENST00000427200 443 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC073614.1-201ENST00000438690 650 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 AL135938.1-201ENST00000443141 297 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 RPL31P41-201ENST00000477967 372 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 RPL9P33-201ENST00000484311 566 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC138761.3-201ENST00000579993 334 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 NRBF2P1-201ENST00000587407 859 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC010149.2-201ENST00000637608 315 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 AC099654.12-201ENST00000639868 649 ntBASIC3.4□□□□□ -1.87
CCDC96Q2M329 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC96Q2M329 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC96Q2M329 CR848007.1-201ENST00000442354 1699 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC96Q2M329 Y_RNA.111-201ENST00000363248 100 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 RN7SKP226-201ENST00000364912 300 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC96Q2M329 RNU5A-6P-201ENST00000384136 116 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 RPL23AP32-201ENST00000395315 459 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 C8orf59P1-201ENST00000429930 303 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC244505.4-201ENST00000434905 287 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 SSXP5-201ENST00000443473 287 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 TPT1P14-201ENST00000448018 505 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 MTND1P12-201ENST00000455231 147 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC008481.1-201ENST00000463278 396 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC114786.4-201ENST00000508771 728 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC114797.1-201ENST00000514003 728 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC245505.1-201ENST00000556398 224 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC025281.1-201ENST00000567026 265 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AC137800.2-201ENST00000574375 120 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 FTX_3.1-201ENST00000610451 147 ntBASIC3.39□□□□□ -1.87
CCDC96Q2M329 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC96Q2M329 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC96Q2M329 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC96Q2M329 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC96Q2M329 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 OR5J1P-201ENST00000313544 939 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 Y_RNA.6-201ENST00000362350 114 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 SNORA5B-201ENST00000363786 132 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 SNORA18.3-201ENST00000384122 132 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 RNU6-517P-201ENST00000384362 110 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 MIR888-201ENST00000401186 77 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 RNU6-648P-201ENST00000410190 107 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC098614.2-201ENST00000426040 255 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC092427.1-202ENST00000430569 476 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 MTND3P21-201ENST00000433774 331 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 RPS20P5-201ENST00000434808 360 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 MTND1P4-201ENST00000435196 415 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC079448.1-201ENST00000449377 373 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 SRRM1P2-201ENST00000464531 1192 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC108078.1-201ENST00000508073 725 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC113155.1-201ENST00000511141 769 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 AC091826.1-201ENST00000514065 313 ntBASIC3.38□□□□□ -1.87
CCDC96Q2M329 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms