Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC006213.4-201ENST00000616184 634 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AL356585.4-201ENST00000623078 1229 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AC090517.3-201ENST00000625170 141 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AL133216.2-202ENST00000634512 349 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
HMGN3Q15651 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
HMGN3Q15651 MIR222-201ENST00000384992 110 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 RNU6-882P-201ENST00000391025 103 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 MIR1290-201ENST00000408735 78 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 Y_RNA.595-201ENST00000410403 105 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN3Q15651 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.64□□□□□ -2.31
HMGN3Q15651 AC007742.1-201ENST00000425789 329 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 AC024082.2-201ENST00000434771 238 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 ELOCP26-201ENST00000436067 329 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 RSU1P2-202ENST00000437884 485 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.64□□□□□ -2.31
HMGN3Q15651 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN3Q15651 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN3Q15651 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN3Q15651 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN3Q15651 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.64□□□□□ -2.31
HMGN3Q15651 RNU6-113P-201ENST00000516653 101 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 AC025857.1-201ENST00000525252 377 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 MIR4422-201ENST00000581938 83 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 AC105224.1-201ENST00000587055 421 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.64□□□□□ -2.31
HMGN3Q15651 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HMGN3Q15651 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HMGN3Q15651 RNU6-167P-201ENST00000384292 106 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 RNU2-68P-201ENST00000410878 191 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 AL135790.2-201ENST00000437701 267 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 Z73417.1-201ENST00000447373 778 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 AC008837.2-201ENST00000513076 418 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.63□□□□□ -2.31
HMGN3Q15651 AP003034.1-201ENST00000534621 422 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGN3Q15651 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.63□□□□□ -2.31
HMGN3Q15651 AC005668.1-201ENST00000571142 476 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 AC007151.1-201ENST00000572774 483 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.63□□□□□ -2.31
HMGN3Q15651 AC004492.1-201ENST00000607036 742 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 AC009233.1-201ENST00000616477 371 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 MIR6130-201ENST00000619419 109 ntBASIC0.63□□□□□ -2.31
HMGN3Q15651 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
HMGN3Q15651 RNU6-439P-201ENST00000384188 106 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 SNORA40.19-201ENST00000390846 128 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 TAF9BP2-201ENST00000400856 499 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AP000275.1-201ENST00000411943 390 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AC009310.1-201ENST00000414414 451 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 CALM1P1-201ENST00000442082 433 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AC104073.1-201ENST00000451988 151 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGN3Q15651 TOMM22P6-201ENST00000465035 409 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGN3Q15651 HMGN1P7-201ENST00000491722 313 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AC108078.2-201ENST00000510750 236 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 RN7SKP265-201ENST00000516448 223 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AC136932.1-201ENST00000574771 208 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 MIR4498-201ENST00000577599 66 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AC108706.1-201ENST00000611053 297 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 STMN1P1-201ENST00000617809 440 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 MIR6767-201ENST00000637302 66 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
HMGN3Q15651 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGN3Q15651 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.62□□□□□ -2.31
HMGN3Q15651 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.62□□□□□ -2.31
HMGN3Q15651 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.61□□□□□ -2.31
HMGN3Q15651 MIR373-201ENST00000362273 69 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 SNORD114-27-201ENST00000363766 70 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 SNORA18.2-201ENST00000383865 132 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 VTA1P1-201ENST00000414044 866 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN3Q15651 UBE2V2P3-201ENST00000433562 437 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN3Q15651 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN3Q15651 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN3Q15651 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN3Q15651 AC018437.1-201ENST00000492214 406 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AC005840.1-201ENST00000498412 377 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AC109927.2-201ENST00000506416 303 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AC113398.2-201ENST00000507630 558 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 TRMT112P2-201ENST00000512910 132 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AP001004.1-201ENST00000582468 324 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 MIR4765-201ENST00000585007 77 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AL121652.1-201ENST00000608851 448 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 AC012676.2-201ENST00000619258 186 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN3Q15651 AC010889.1-201ENST00000566193 2666 ntBASIC0.61□□□□□ -2.31
HMGN3Q15651 SNORD115-3-201ENST00000363100 82 ntBASIC0.6□□□□□ -2.31
HMGN3Q15651 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
HMGN3Q15651 RNU6-1222P-201ENST00000384615 107 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 436 ms