Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDH1Q08174 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDH1Q08174 AC034236.1-201ENST00000469891 373 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 AC010285.1-201ENST00000470580 392 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 MED28P2-201ENST00000475771 317 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 AC091868.1-201ENST00000508746 304 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 RNU7-175P-201ENST00000515915 61 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 RNU6-1338P-201ENST00000516328 91 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 MIR2355-201ENST00000517199 87 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH1Q08174 AC004024.1-201ENST00000549244 247 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 AC015912.2-201ENST00000571053 181 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 AC209154.1-201ENST00000582156 337 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 RPL23AP78-201ENST00000599928 470 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH1Q08174 AC090617.7-201ENST00000623952 126 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDH1Q08174 AL133243.3-201ENST00000617415 3004 ntBASIC4.55□□□□□ -1.68
PCDH1Q08174 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH1Q08174 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH1Q08174 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH1Q08174 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH1Q08174 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDH1Q08174 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH1Q08174 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH1Q08174 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH1Q08174 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH1Q08174 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH1Q08174 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH1Q08174 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH1Q08174 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH1Q08174 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDH1Q08174 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDH1Q08174 Y_RNA.123-201ENST00000363338 102 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 Y_RNA.150-201ENST00000363562 102 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 RN7SKP103-201ENST00000363848 320 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 RNU6-335P-201ENST00000364563 113 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 Y_RNA.270-201ENST00000364693 104 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 RNU5E-7P-201ENST00000365290 117 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDH1Q08174 COX6B1P1-201ENST00000415962 213 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 BX510359.2-201ENST00000417920 305 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 TMEM167AP1-201ENST00000423409 219 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 AL591043.1-201ENST00000432461 424 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH1Q08174 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDH1Q08174 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH1Q08174 AC139453.3-201ENST00000493276 369 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH1Q08174 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.54□□□□□ -1.68
PCDH1Q08174 AC022868.1-201ENST00000517767 391 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 IGKV1-32-201ENST00000519290 311 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH1Q08174 MIR3934-201ENST00000579806 107 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 MIR4737-201ENST00000583979 81 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 Mico1.1-201ENST00000611698 204 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 AC140113.4-201ENST00000622087 222 ntBASIC4.54□□□□□ -1.68
PCDH1Q08174 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH1Q08174 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDH1Q08174 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH1Q08174 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH1Q08174 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDH1Q08174 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PCDH1Q08174 AC139713.2-215ENST00000641428 5037 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 AC022893.2-201ENST00000564832 3296 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDH1Q08174 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH1Q08174 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PCDH1Q08174 Y_RNA.143-201ENST00000363520 106 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 Y_RNA.277-201ENST00000364754 102 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 MIR1290-201ENST00000408735 78 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 AL590762.4-201ENST00000425885 253 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH1Q08174 AC104332.1-201ENST00000440471 797 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 AL078601.1-201ENST00000444542 271 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 AC079168.2-201ENST00000453977 416 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH1Q08174 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
PCDH1Q08174 ANXA2P1-201ENST00000505539 926 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 RNU6-572P-201ENST00000516724 80 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 CASP1P1-201ENST00000526345 212 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
PCDH1Q08174 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDH1Q08174 RN7SL176P-201ENST00000580352 264 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 Y_RNA.772-201ENST00000606692 102 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 uc_338.18-201ENST00000615451 175 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 AC090132.2-201ENST00000615881 347 ntBASIC4.53□□□□□ -1.68
PCDH1Q08174 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDH1Q08174 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PCDH1Q08174 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH1Q08174 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDH1Q08174 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH1Q08174 NOL8P1-201ENST00000508336 3529 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PCDH1Q08174 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 SDAD1P1-202ENST00000524156 2051 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PCDH1Q08174 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms