Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 HMGN2P15-201ENST00000585707 270 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 AL356280.1-201ENST00000603614 379 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 MTCYBP22-201ENST00000603788 447 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 MTND4LP5-201ENST00000605152 292 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 FTX_3.1-201ENST00000610451 147 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 HMGB1P24-202ENST00000615653 685 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.14□□□□□ -2.07
HMGCS1Q01581 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HMGCS1Q01581 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGCS1Q01581 AL445523.1-201ENST00000451184 1362 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGCS1Q01581 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGCS1Q01581 SNORA80E-201ENST00000384744 137 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 AL445529.1-201ENST00000398713 389 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 MTCYBP36-201ENST00000404146 440 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HMGCS1Q01581 ZNF863P-201ENST00000426746 417 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGCS1Q01581 HIGD1AP2-201ENST00000446367 280 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 COX6CP12-201ENST00000446748 202 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 RNU7-125P-201ENST00000458760 62 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGCS1Q01581 AF131216.2-201ENST00000512316 564 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 RNU6-927P-201ENST00000516199 100 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 RNA5SP291-201ENST00000517222 105 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGCS1Q01581 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGCS1Q01581 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGCS1Q01581 AC091489.2-201ENST00000566263 604 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 AC002400.1-201ENST00000569310 726 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
HMGCS1Q01581 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.13□□□□□ -2.07
HMGCS1Q01581 AP001981.2-201ENST00000603241 418 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 AC013562.2-201ENST00000611632 603 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 AC010149.2-201ENST00000637608 315 ntBASIC2.13□□□□□ -2.07
HMGCS1Q01581 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGCS1Q01581 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC006020.1-201ENST00000420179 1854 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 RNU4-53P-201ENST00000410828 140 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 AL139413.1-201ENST00000421309 217 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 MTCO3P30-201ENST00000426425 670 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AL365184.2-201ENST00000431139 435 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 MYL8P-204ENST00000431574 518 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 UBE2D3P1-201ENST00000436669 444 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AL512286.1-201ENST00000439244 400 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC118469.1-201ENST00000442943 488 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 EPS15P1-201ENST00000448836 336 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 ZNF114P1-201ENST00000453500 292 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 AL160314.1-201ENST00000490836 438 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC114786.4-201ENST00000508771 728 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC107222.1-201ENST00000510899 637 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC010486.1-201ENST00000511793 424 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 RNA5SP290-201ENST00000517133 127 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC022634.1-201ENST00000520765 532 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 MTND4LP18-201ENST00000526864 291 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 LRRC34P1-201ENST00000542742 915 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AP002770.2-201ENST00000543613 532 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 LRRC37A5P-203ENST00000580181 585 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 MIR3146-201ENST00000580367 79 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 MIR4435-1-201ENST00000582552 80 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC105129.3-201ENST00000605455 485 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC018638.7-201ENST00000605836 1114 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC011890.2-201ENST00000613393 294 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGCS1Q01581 AC093591.3-201ENST00000634516 308 ntBASIC2.12□□□□□ -2.07
HMGCS1Q01581 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HMGCS1Q01581 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 RNU5F-6P-201ENST00000362979 116 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 RNU6-884P-201ENST00000363889 107 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 RNY3P13-201ENST00000365542 102 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 MIR524-201ENST00000385242 87 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC005005.2-201ENST00000420779 380 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 CECR9-201ENST00000453421 199 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms