Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL603865.2-201ENST00000401679 213 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC068533.2-201ENST00000411872 306 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL20P78556 AC074117.2-201ENST00000417130 397 ntBASIC1.28□□□□□ -2.2
CCL20P78556 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL20P78556 GTF2IP3-201ENST00000433887 494 ntBASIC1.28□□□□□ -2.2
CCL20P78556 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL20P78556 AL353706.1-201ENST00000436728 494 ntBASIC1.28□□□□□ -2.2
CCL20P78556 RSU1P2-202ENST00000437884 485 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL20P78556 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL20P78556 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.28□□□□□ -2.2
CCL20P78556 OR6C5P-201ENST00000452388 923 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC112771.1-201ENST00000463581 102 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC117503.1-201ENST00000472241 394 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC011005.2-201ENST00000487324 359 ntBASIC1.28□□□□□ -2.2
CCL20P78556 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL20P78556 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.28□□□□□ -2.2
CCL20P78556 RPL9P6-201ENST00000492764 598 ntBASIC1.28□□□□□ -2.2
CCL20P78556 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CCL20P78556 AC114781.4-201ENST00000513707 639 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC034114.1-201ENST00000520293 285 ntBASIC1.28□□□□□ -2.2
CCL20P78556 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL20P78556 AC084851.1-201ENST00000529105 249 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL20P78556 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.28□□□□□ -2.2
CCL20P78556 DUXAP1-201ENST00000556632 463 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.28□□□□□ -2.2
CCL20P78556 MIR1273D-201ENST00000577266 86 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL20P78556 AC091057.3-201ENST00000602684 733 ntBASIC1.28□□□□□ -2.2
CCL20P78556 DPPA3P3-201ENST00000603842 430 ntBASIC1.28□□□□□ -2.2
CCL20P78556 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL20P78556 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.28□□□□□ -2.2
CCL20P78556 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL20P78556 AL079343.1-201ENST00000572358 1771 ntBASIC1.27□□□□□ -2.21
CCL20P78556 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CCL20P78556 NACAP2-201ENST00000318548 624 ntBASIC1.27□□□□□ -2.21
CCL20P78556 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCL20P78556 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CCL20P78556 SNORA5B-201ENST00000363786 132 ntBASIC1.27□□□□□ -2.21
CCL20P78556 SNORD46.1-201ENST00000364139 104 ntBASIC1.27□□□□□ -2.21
CCL20P78556 SNORA70.4-201ENST00000365509 134 ntBASIC1.27□□□□□ -2.21
CCL20P78556 MIR95-201ENST00000385072 81 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AL139397.2-201ENST00000404529 772 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AL021407.1-201ENST00000404531 386 ntBASIC1.27□□□□□ -2.21
CCL20P78556 OR9R1P-201ENST00000412200 877 ntBASIC1.27□□□□□ -2.21
CCL20P78556 USP9YP6-201ENST00000413550 854 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AL135786.1-201ENST00000415892 214 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AL353621.1-201ENST00000418219 243 ntBASIC1.27□□□□□ -2.21
CCL20P78556 USP9YP26-201ENST00000421008 661 ntBASIC1.27□□□□□ -2.21
CCL20P78556 C1DP1-201ENST00000426049 402 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AC244035.1-201ENST00000430042 390 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL20P78556 RPL7P34-201ENST00000433316 712 ntBASIC1.27□□□□□ -2.21
CCL20P78556 MTND4P15-201ENST00000437913 1033 ntBASIC1.27□□□□□ -2.21
CCL20P78556 MTND5P14-201ENST00000441481 1267 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL20P78556 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL20P78556 MTND1P31-201ENST00000449206 961 ntBASIC1.27□□□□□ -2.21
CCL20P78556 FABP5P15-201ENST00000453566 214 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AP001486.1-201ENST00000463339 476 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AC093809.1-201ENST00000509155 340 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.27□□□□□ -2.21
CCL20P78556 RNU6-362P-201ENST00000516736 90 ntBASIC1.27□□□□□ -2.21
CCL20P78556 SNORA48.11-201ENST00000517015 89 ntBASIC1.27□□□□□ -2.21
CCL20P78556 SNORA70.24-201ENST00000517233 118 ntBASIC1.27□□□□□ -2.21
CCL20P78556 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.27□□□□□ -2.21
CCL20P78556 DUXAP5-201ENST00000529668 529 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.27□□□□□ -2.21
CCL20P78556 EIF4BP1-201ENST00000554881 351 ntBASIC1.27□□□□□ -2.21
CCL20P78556 AC026271.5-201ENST00000577873 130 ntBASIC1.27□□□□□ -2.21
CCL20P78556 uc_338.5-201ENST00000611839 155 ntBASIC1.27□□□□□ -2.21
CCL20P78556 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.27□□□□□ -2.21
CCL20P78556 AC231657.1-201ENST00000624313 397 ntBASIC1.27□□□□□ -2.21
CCL20P78556 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCL20P78556 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.26□□□□□ -2.21
CCL20P78556 RNU6-512P-201ENST00000364438 103 ntBASIC1.26□□□□□ -2.21
CCL20P78556 SNORA40.19-201ENST00000390846 128 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AL591034.2-201ENST00000402839 359 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AC019129.1-201ENST00000403786 261 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.26□□□□□ -2.21
CCL20P78556 VN1R36P-201ENST00000414936 291 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AL449283.1-202ENST00000418249 604 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.26□□□□□ -2.21
CCL20P78556 MRPS36P1-201ENST00000421291 307 ntBASIC1.26□□□□□ -2.21
CCL20P78556 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.26□□□□□ -2.21
CCL20P78556 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCL20P78556 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.26□□□□□ -2.21
CCL20P78556 MTCYBP42-201ENST00000444653 1130 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AC096638.1-201ENST00000444678 216 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.26□□□□□ -2.21
CCL20P78556 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.26□□□□□ -2.21
CCL20P78556 AC010631.1-201ENST00000474150 156 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AC104563.1-201ENST00000476147 376 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AC018868.1-201ENST00000491307 315 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AC139453.3-201ENST00000493276 369 ntBASIC1.26□□□□□ -2.21
CCL20P78556 AC096745.1-201ENST00000509945 370 ntBASIC1.26□□□□□ -2.21
CCL20P78556 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCL20P78556 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms