Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AP000889.1-201ENST00000530968 660 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 ELOCP31-201ENST00000540463 467 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AC090115.3-201ENST00000553218 849 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AC005951.2-201ENST00000576282 495 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.26□□□□□ -1.73
HERVK_113P62684 SNRPGP17-201ENST00000603780 214 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AL137849.1-201ENST00000604767 169 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.26□□□□□ -1.73
HERVK_113P62684 AL355365.1-201ENST00000616480 294 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AC244517.12-201ENST00000623581 663 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 MTND5P42-201ENST00000637720 498 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 HSPA8P4-201ENST00000511877 1920 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HERVK_113P62684 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERVK_113P62684 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HERVK_113P62684 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.25□□□□□ -1.73
HERVK_113P62684 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AC090337.1-201ENST00000579651 2074 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERVK_113P62684 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERVK_113P62684 RNU6-601P-201ENST00000384540 107 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 RNU6-14P-201ENST00000384630 106 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 RNA5SP424-201ENST00000390988 115 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 Z92545.1-201ENST00000411782 234 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 AC245054.2-201ENST00000415639 319 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 RPLP0P7-201ENST00000416050 667 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 HMGB1P27-201ENST00000431429 603 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.25□□□□□ -1.73
HERVK_113P62684 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.25□□□□□ -1.73
HERVK_113P62684 CYCSP32-201ENST00000440548 321 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 Y_RNA.653-201ENST00000459091 95 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 RN7SL601P-201ENST00000471221 293 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.25□□□□□ -1.73
HERVK_113P62684 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AC008526.1-201ENST00000509149 338 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 RN7SKP258-201ENST00000517151 304 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.25□□□□□ -1.73
HERVK_113P62684 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.25□□□□□ -1.73
HERVK_113P62684 IMMP1LP2-201ENST00000552954 492 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AC090877.1-201ENST00000561418 344 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.25□□□□□ -1.73
HERVK_113P62684 MIR5690-201ENST00000583739 73 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 MIR5692C1-201ENST00000585309 91 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AL353748.2-201ENST00000622148 471 ntBASIC4.25□□□□□ -1.73
HERVK_113P62684 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERVK_113P62684 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERVK_113P62684 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HERVK_113P62684 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HERVK_113P62684 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.25□□□□□ -1.73
HERVK_113P62684 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.25□□□□□ -1.73
HERVK_113P62684 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERVK_113P62684 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERVK_113P62684 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.24□□□□□ -1.73
HERVK_113P62684 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.24□□□□□ -1.73
HERVK_113P62684 Y_RNA.399-201ENST00000383955 105 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 RPL7P10-201ENST00000417407 739 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 SKA2P1-201ENST00000425592 390 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 RPL32P28-201ENST00000443577 397 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 MTND1P17-201ENST00000448961 204 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.24□□□□□ -1.73
HERVK_113P62684 AP000926.1-201ENST00000479573 241 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AL163540.1-201ENST00000485382 386 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 RPL32P34-201ENST00000486380 400 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AC026784.1-201ENST00000507986 352 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 SNORA14.1-201ENST00000516113 141 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 RNU6-1332P-201ENST00000516666 104 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 RNU6-323P-201ENST00000521915 107 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.24□□□□□ -1.73
HERVK_113P62684 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AC011471.1-201ENST00000585766 187 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.24□□□□□ -1.73
HERVK_113P62684 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.24□□□□□ -1.73
HERVK_113P62684 AP001836.1-201ENST00000604675 523 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AC016925.2-201ENST00000605108 242 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AL138726.1-201ENST00000614873 333 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.24□□□□□ -1.73
HERVK_113P62684 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.24□□□□□ -1.73
HERVK_113P62684 AP000553.6-201ENST00000641242 118 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERVK_113P62684 ZNF519P1-201ENST00000449011 1626 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERVK_113P62684 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
HERVK_113P62684 AL356489.2-201ENST00000566968 3528 ntBASIC4.24□□□□□ -1.73
HERVK_113P62684 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERVK_113P62684 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERVK_113P62684 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HERVK_113P62684 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms