Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1□□□□□ -2.25
CKS1BP61024 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
CKS1BP61024 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CKS1BP61024 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CKS1BP61024 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CKS1BP61024 RNU6-40P-201ENST00000384254 107 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 MIR504-201ENST00000385065 83 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AL627390.1-201ENST00000396055 340 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AL591034.2-201ENST00000402839 359 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.99□□□□□ -2.25
CKS1BP61024 MIR1302-8-201ENST00000408342 128 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 RNU4-26P-201ENST00000410270 107 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
CKS1BP61024 USP9YP35-201ENST00000435696 412 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 MOB1AP2-201ENST00000446060 614 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AC017099.1-201ENST00000448261 1028 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CKS1BP61024 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.99□□□□□ -2.25
CKS1BP61024 USP9YP10-201ENST00000454868 628 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AC005908.1-201ENST00000468701 347 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 RPS15AP17-201ENST00000470598 390 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 RPL36AP48-201ENST00000485521 314 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 RPS29P21-201ENST00000496272 170 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.99□□□□□ -2.25
CKS1BP61024 RNU6-760P-201ENST00000516078 97 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 SNORA31.24-201ENST00000517232 57 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.99□□□□□ -2.25
CKS1BP61024 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.99□□□□□ -2.25
CKS1BP61024 RPL21P5-201ENST00000554662 472 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AC093519.1-201ENST00000566109 298 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AC005668.1-201ENST00000571142 476 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 AL603758.1-201ENST00000618654 241 ntBASIC0.99□□□□□ -2.25
CKS1BP61024 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CKS1BP61024 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.98□□□□□ -2.25
CKS1BP61024 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC0.98□□□□□ -2.25
CKS1BP61024 SNORA70B-201ENST00000384210 135 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 RNA5SP501-201ENST00000410990 112 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.98□□□□□ -2.25
CKS1BP61024 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.98□□□□□ -2.25
CKS1BP61024 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CKS1BP61024 NANOGP2-201ENST00000435391 727 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.98□□□□□ -2.25
CKS1BP61024 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.98□□□□□ -2.25
CKS1BP61024 RPL23AP23-201ENST00000452590 471 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.98□□□□□ -2.25
CKS1BP61024 AL160314.1-201ENST00000490836 438 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 RPS15AP36-201ENST00000492022 382 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.98□□□□□ -2.25
CKS1BP61024 AC048346.1-201ENST00000510247 144 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 RNA5SP61-201ENST00000516453 100 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.98□□□□□ -2.25
CKS1BP61024 AC019288.1-201ENST00000557918 224 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AC005951.2-201ENST00000576282 495 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AC002545.1-201ENST00000592511 181 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.98□□□□□ -2.25
CKS1BP61024 AC004853.1-201ENST00000604902 698 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 ELOCP5-201ENST00000604924 333 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AL050343.2-201ENST00000607338 280 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AC009318.2-201ENST00000610917 651 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 RMST_6.1-201ENST00000611980 203 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AL109620.1-201ENST00000618738 1197 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 MIR6852-201ENST00000621699 66 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.98□□□□□ -2.25
CKS1BP61024 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.98□□□□□ -2.25
CKS1BP61024 AL512506.2-201ENST00000624472 458 ntBASIC0.98□□□□□ -2.25
CKS1BP61024 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.98□□□□□ -2.25
CKS1BP61024 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CKS1BP61024 AC002543.1-201ENST00000299783 1954 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 DBF4P1-201ENST00000412976 1892 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 CBX3P1-201ENST00000325243 554 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 RNU1-23P-201ENST00000363361 144 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 SNORA25.8-201ENST00000364831 128 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 SNORD116-23-201ENST00000384645 92 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CKS1BP61024 RNU11-3P-201ENST00000391111 133 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AC127391.1-201ENST00000411737 98 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 RPL37P10-201ENST00000412884 288 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AL592310.1-201ENST00000414330 671 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AL353621.1-201ENST00000418219 243 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AL354695.1-201ENST00000427935 228 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AL353706.1-201ENST00000436728 494 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AC245102.2-201ENST00000448956 180 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.97□□□□□ -2.25
CKS1BP61024 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.97□□□□□ -2.25
CKS1BP61024 AMD1P1-201ENST00000457220 922 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AL441985.1-201ENST00000457727 251 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 UBE2DNL-203ENST00000474922 222 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AC139453.3-201ENST00000493276 369 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 RNU6-840P-201ENST00000517275 65 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AP004247.1-201ENST00000531556 1289 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.97□□□□□ -2.25
CKS1BP61024 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.97□□□□□ -2.25
CKS1BP61024 AC091544.4-201ENST00000555268 342 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.97□□□□□ -2.25
CKS1BP61024 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
CKS1BP61024 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.97□□□□□ -2.25
CKS1BP61024 LARP7P2-201ENST00000575306 125 ntBASIC0.97□□□□□ -2.25
CKS1BP61024 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.97□□□□□ -2.25
CKS1BP61024 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms