Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC234778.2-201ENST00000566241 354 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.6□□□□□ -1.99
SRP54P61011 MIR3118-1-201ENST00000581787 76 ntBASIC2.6□□□□□ -1.99
SRP54P61011 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SRP54P61011 AL365204.3-201ENST00000612448 685 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AC104010.1-201ENST00000616889 150 ntBASIC2.6□□□□□ -1.99
SRP54P61011 AL589994.2-201ENST00000621124 579 ntBASIC2.6□□□□□ -1.99
SRP54P61011 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.6□□□□□ -1.99
SRP54P61011 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SRP54P61011 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SRP54P61011 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SRP54P61011 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SRP54P61011 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SRP54P61011 RNU6-658P-201ENST00000384606 106 ntBASIC2.59□□□□□ -1.99
SRP54P61011 Y_RNA.608-201ENST00000410647 95 ntBASIC2.59□□□□□ -1.99
SRP54P61011 RPS12P24-201ENST00000412619 387 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AL139413.1-201ENST00000421309 217 ntBASIC2.59□□□□□ -1.99
SRP54P61011 MTND4P20-201ENST00000424125 869 ntBASIC2.59□□□□□ -1.99
SRP54P61011 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.59□□□□□ -1.99
SRP54P61011 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.59□□□□□ -1.99
SRP54P61011 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
SRP54P61011 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.59□□□□□ -1.99
SRP54P61011 MTND4P25-201ENST00000441039 533 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AL590365.1-201ENST00000450788 243 ntBASIC2.59□□□□□ -1.99
SRP54P61011 RPS3P1-201ENST00000456781 192 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AC004263.1-201ENST00000479327 332 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.59□□□□□ -1.99
SRP54P61011 MTND1P3-201ENST00000484956 952 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.59□□□□□ -1.99
SRP54P61011 RNA5SP148-201ENST00000516527 94 ntBASIC2.59□□□□□ -1.99
SRP54P61011 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.59□□□□□ -1.99
SRP54P61011 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.59□□□□□ -1.99
SRP54P61011 ZNF321P-202ENST00000550843 495 ntBASIC2.59□□□□□ -1.99
SRP54P61011 MIR4635-201ENST00000583759 79 ntBASIC2.59□□□□□ -1.99
SRP54P61011 MIR3117-201ENST00000584034 78 ntBASIC2.59□□□□□ -1.99
SRP54P61011 MIR4298-201ENST00000584380 73 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AL356575.1-201ENST00000603008 283 ntBASIC2.59□□□□□ -1.99
SRP54P61011 BNIP3P9-201ENST00000603714 553 ntBASIC2.59□□□□□ -1.99
SRP54P61011 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.59□□□□□ -1.99
SRP54P61011 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.59□□□□□ -1.99
SRP54P61011 AC011890.2-201ENST00000613393 294 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AC092140.2-201ENST00000618027 521 ntBASIC2.59□□□□□ -1.99
SRP54P61011 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.59□□□□□ -1.99
SRP54P61011 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.59□□□□□ -1.99
SRP54P61011 AP002791.1-201ENST00000623291 381 ntBASIC2.59□□□□□ -1.99
SRP54P61011 MTND5P42-201ENST00000637720 498 ntBASIC2.59□□□□□ -1.99
SRP54P61011 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SRP54P61011 ADAM3A-203ENST00000461344 2157 ntBASIC2.59□□□□□ -2
SRP54P61011 AC135776.4-201ENST00000624300 1904 ntBASIC2.58□□□□□ -2
SRP54P61011 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SRP54P61011 SNORD62.1-201ENST00000362541 86 ntBASIC2.58□□□□□ -2
SRP54P61011 RNU6-960P-201ENST00000364056 120 ntBASIC2.58□□□□□ -2
SRP54P61011 RNU6-188P-201ENST00000364207 107 ntBASIC2.58□□□□□ -2
SRP54P61011 U3.12-201ENST00000364498 214 ntBASIC2.58□□□□□ -2
SRP54P61011 RNA5SP126-201ENST00000365092 109 ntBASIC2.58□□□□□ -2
SRP54P61011 SMIM11P1-201ENST00000369586 178 ntBASIC2.58□□□□□ -2
SRP54P61011 MIR592-201ENST00000384959 97 ntBASIC2.58□□□□□ -2
SRP54P61011 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.58□□□□□ -2
SRP54P61011 RPLP0P7-201ENST00000416050 667 ntBASIC2.58□□□□□ -2
SRP54P61011 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 AL592045.1-201ENST00000429867 352 ntBASIC2.58□□□□□ -2
SRP54P61011 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.58□□□□□ -2
SRP54P61011 ST13P20-201ENST00000447996 1065 ntBASIC2.58□□□□□ -2
SRP54P61011 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 ZNF114P1-201ENST00000453500 292 ntBASIC2.58□□□□□ -2
SRP54P61011 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.58□□□□□ -2
SRP54P61011 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 AC010486.1-201ENST00000511793 424 ntBASIC2.58□□□□□ -2
SRP54P61011 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 RNA5SP282-201ENST00000516355 108 ntBASIC2.58□□□□□ -2
SRP54P61011 RNU6-677P-201ENST00000516914 101 ntBASIC2.58□□□□□ -2
SRP54P61011 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.58□□□□□ -2
SRP54P61011 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SRP54P61011 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SRP54P61011 AC006199.1-201ENST00000548728 219 ntBASIC2.58□□□□□ -2
SRP54P61011 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.58□□□□□ -2
SRP54P61011 AC027807.1-201ENST00000559921 996 ntBASIC2.58□□□□□ -2
SRP54P61011 AC009163.5-201ENST00000575421 637 ntBASIC2.58□□□□□ -2
SRP54P61011 MIR5697-201ENST00000578045 78 ntBASIC2.58□□□□□ -2
SRP54P61011 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.58□□□□□ -2
SRP54P61011 AC174048.1-201ENST00000603389 144 ntBASIC2.58□□□□□ -2
SRP54P61011 AC138749.5-201ENST00000611461 208 ntBASIC2.58□□□□□ -2
SRP54P61011 AC104237.2-201ENST00000612456 443 ntBASIC2.58□□□□□ -2
SRP54P61011 AC116165.2-201ENST00000616705 206 ntBASIC2.58□□□□□ -2
SRP54P61011 AC243829.7-201ENST00000633081 225 ntBASIC2.58□□□□□ -2
SRP54P61011 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.58□□□□□ -2
SRP54P61011 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
SRP54P61011 AC004520.1-201ENST00000608362 1413 ntBASIC2.58□□□□□ -2
SRP54P61011 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.57□□□□□ -2
SRP54P61011 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.57□□□□□ -2
SRP54P61011 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
SRP54P61011 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.57□□□□□ -2
SRP54P61011 HSPE1P11-201ENST00000339579 310 ntBASIC2.57□□□□□ -2
SRP54P61011 AL445529.1-201ENST00000398713 389 ntBASIC2.57□□□□□ -2
SRP54P61011 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.57□□□□□ -2
SRP54P61011 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.57□□□□□ -2
SRP54P61011 RPS15AP12-201ENST00000419498 388 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms