Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC093752.1-206ENST00000511823 336 ntBASIC1.63□□□□□ -2.15
ACTBP60709 RNA5SP290-201ENST00000517133 127 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.63□□□□□ -2.15
ACTBP60709 MTCO2P15-201ENST00000532655 656 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.63□□□□□ -2.15
ACTBP60709 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.63□□□□□ -2.15
ACTBP60709 MIR5089-201ENST00000580047 84 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AL031274.2-201ENST00000599419 203 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.63□□□□□ -2.15
ACTBP60709 Y_RNA.783-201ENST00000613546 102 ntBASIC1.63□□□□□ -2.15
ACTBP60709 MIR6715A-201ENST00000615929 79 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AL136981.2-201ENST00000617319 734 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AL356094.1-201ENST00000624663 1212 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AC110994.2-201ENST00000635481 492 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AC104454.1-201ENST00000421341 1401 ntBASIC1.63□□□□□ -2.15
ACTBP60709 MTND5P29-201ENST00000458676 1807 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AL390862.1-201ENST00000635467 1469 ntBASIC1.63□□□□□ -2.15
ACTBP60709 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
ACTBP60709 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ACTBP60709 RNU1-72P-201ENST00000362976 153 ntBASIC1.62□□□□□ -2.15
ACTBP60709 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
ACTBP60709 U3.13-201ENST00000364804 214 ntBASIC1.62□□□□□ -2.15
ACTBP60709 RNA5SP450-201ENST00000411206 102 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.62□□□□□ -2.15
ACTBP60709 AL445685.2-201ENST00000422551 342 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC013262.1-201ENST00000426710 252 ntBASIC1.62□□□□□ -2.15
ACTBP60709 Z98742.2-201ENST00000431564 187 ntBASIC1.62□□□□□ -2.15
ACTBP60709 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.62□□□□□ -2.15
ACTBP60709 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.62□□□□□ -2.15
ACTBP60709 HMGN2P10-201ENST00000448085 265 ntBASIC1.62□□□□□ -2.15
ACTBP60709 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.62□□□□□ -2.15
ACTBP60709 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.62□□□□□ -2.15
ACTBP60709 RPS29P21-201ENST00000496272 170 ntBASIC1.62□□□□□ -2.15
ACTBP60709 YWHAEP4-201ENST00000505390 198 ntBASIC1.62□□□□□ -2.15
ACTBP60709 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.62□□□□□ -2.15
ACTBP60709 RNY4P37-201ENST00000516225 96 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.62□□□□□ -2.15
ACTBP60709 DEFB131D-201ENST00000526803 184 ntBASIC1.62□□□□□ -2.15
ACTBP60709 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.62□□□□□ -2.15
ACTBP60709 AC005832.3-201ENST00000537929 631 ntBASIC1.62□□□□□ -2.15
ACTBP60709 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.62□□□□□ -2.15
ACTBP60709 DUXAP1-201ENST00000556632 463 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC021739.1-201ENST00000559631 174 ntBASIC1.62□□□□□ -2.15
ACTBP60709 MIR4648-201ENST00000580107 72 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.62□□□□□ -2.15
ACTBP60709 AC104984.5-201ENST00000586878 94 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC005261.5-201ENST00000596280 355 ntBASIC1.62□□□□□ -2.15
ACTBP60709 MTCYBP22-201ENST00000603788 447 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC091152.3-201ENST00000604227 325 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AL021368.1-201ENST00000607490 540 ntBASIC1.62□□□□□ -2.15
ACTBP60709 AC079416.3-201ENST00000624479 549 ntBASIC1.62□□□□□ -2.15
ACTBP60709 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ACTBP60709 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
ACTBP60709 Y_RNA.245-201ENST00000364493 95 ntBASIC1.61□□□□□ -2.15
ACTBP60709 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.61□□□□□ -2.15
ACTBP60709 RNA5SP212-201ENST00000391223 107 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AL139397.2-201ENST00000404529 772 ntBASIC1.61□□□□□ -2.15
ACTBP60709 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.61□□□□□ -2.15
ACTBP60709 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AL121890.1-201ENST00000435457 205 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.61□□□□□ -2.15
ACTBP60709 TPT1P14-201ENST00000448018 505 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.61□□□□□ -2.15
ACTBP60709 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.61□□□□□ -2.15
ACTBP60709 AL441985.1-201ENST00000457727 251 ntBASIC1.61□□□□□ -2.15
ACTBP60709 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
ACTBP60709 AC140059.1-201ENST00000489238 361 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.61□□□□□ -2.15
ACTBP60709 AC092436.1-201ENST00000506450 503 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC110760.3-202ENST00000515177 371 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ACTBP60709 AC107953.1-201ENST00000522216 297 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC023538.1-201ENST00000534576 736 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC087894.1-201ENST00000538359 518 ntBASIC1.61□□□□□ -2.15
ACTBP60709 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC006199.1-201ENST00000548728 219 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC007375.1-201ENST00000554513 578 ntBASIC1.61□□□□□ -2.15
ACTBP60709 MTCYBP23-201ENST00000558717 1102 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.61□□□□□ -2.15
ACTBP60709 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.61□□□□□ -2.15
ACTBP60709 AC126365.2-201ENST00000580630 379 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC008507.2-201ENST00000588402 1176 ntBASIC1.61□□□□□ -2.15
ACTBP60709 MTATP6P2-201ENST00000603319 678 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC103710.1-201ENST00000610003 901 ntBASIC1.61□□□□□ -2.15
ACTBP60709 AC007490.1-201ENST00000624321 703 ntBASIC1.61□□□□□ -2.15
ACTBP60709 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.61□□□□□ -2.15
ACTBP60709 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ACTBP60709 RNU4-42P-201ENST00000364738 142 ntBASIC1.6□□□□□ -2.15
ACTBP60709 SNORA40.2-201ENST00000390847 128 ntBASIC1.6□□□□□ -2.15
ACTBP60709 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.6□□□□□ -2.15
ACTBP60709 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.6□□□□□ -2.15
ACTBP60709 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.6□□□□□ -2.15
ACTBP60709 AL445646.1-201ENST00000431784 216 ntBASIC1.6□□□□□ -2.15
ACTBP60709 NANOGP2-201ENST00000435391 727 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.6□□□□□ -2.15
ACTBP60709 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.6□□□□□ -2.15
ACTBP60709 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.6□□□□□ -2.15
ACTBP60709 CECR9-201ENST00000453421 199 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC005410.1-202ENST00000460347 485 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms