Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLRN1P58418 Y_RNA.252-201ENST00000364556 101 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLRN1P58418 SNORA3C-201ENST00000408792 125 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 RN7SKP177-201ENST00000410567 355 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AL030996.1-201ENST00000411430 235 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.62□□□□□ -1.83
CLRN1P58418 SYF2P2-201ENST00000417620 583 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.62□□□□□ -1.83
CLRN1P58418 AL358472.1-201ENST00000431295 329 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 VDAC1P3-201ENST00000434069 851 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.62□□□□□ -1.83
CLRN1P58418 H2AFZP6-201ENST00000444403 394 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AC009237.8-201ENST00000445492 379 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 NUTF2P3-201ENST00000448540 384 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 PCMTD1P1-201ENST00000455560 355 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 RPL31P13-201ENST00000484151 370 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.62□□□□□ -1.83
CLRN1P58418 AC022493.2-201ENST00000506122 481 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 HMGN1P11-201ENST00000508668 303 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 RNU6-699P-201ENST00000517081 110 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.62□□□□□ -1.83
CLRN1P58418 AC025755.1-201ENST00000521306 278 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.62□□□□□ -1.83
CLRN1P58418 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.62□□□□□ -1.83
CLRN1P58418 GNRHR2P1-201ENST00000555315 631 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.62□□□□□ -1.83
CLRN1P58418 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.62□□□□□ -1.83
CLRN1P58418 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.62□□□□□ -1.83
CLRN1P58418 MIR3138-201ENST00000585238 82 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
CLRN1P58418 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.62□□□□□ -1.83
CLRN1P58418 AL773545.4-201ENST00000637262 310 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 AL513478.4-201ENST00000641636 310 ntBASIC3.62□□□□□ -1.83
CLRN1P58418 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CLRN1P58418 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLRN1P58418 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLRN1P58418 MTND5P16-201ENST00000460269 1703 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLRN1P58418 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.61□□□□□ -1.83
CLRN1P58418 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLRN1P58418 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.61□□□□□ -1.83
CLRN1P58418 RNU6-490P-201ENST00000362985 107 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 RNU6-1032P-201ENST00000384100 107 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 RNA5SP239-201ENST00000410218 129 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 Y_RNA.625-201ENST00000411256 107 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 HSPE1P12-201ENST00000412576 301 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AC004552.1-201ENST00000419089 348 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.61□□□□□ -1.83
CLRN1P58418 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.61□□□□□ -1.83
CLRN1P58418 PGBD4P6-201ENST00000421501 610 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.61□□□□□ -1.83
CLRN1P58418 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.61□□□□□ -1.83
CLRN1P58418 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLRN1P58418 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.61□□□□□ -1.83
CLRN1P58418 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.61□□□□□ -1.83
CLRN1P58418 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.61□□□□□ -1.83
CLRN1P58418 AL583843.1-201ENST00000456070 346 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 RPS26P3-201ENST00000470205 348 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.61□□□□□ -1.83
CLRN1P58418 AC090543.2-201ENST00000483963 348 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AC004057.1-201ENST00000485827 348 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 RN7SL271P-201ENST00000487601 295 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AC005921.1-201ENST00000510589 286 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AC113155.1-201ENST00000511141 769 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLRN1P58418 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.61□□□□□ -1.83
CLRN1P58418 RNA5SP165-201ENST00000517142 115 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 Y_RNA.720-201ENST00000517166 92 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AP003730.1-201ENST00000524605 285 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 TRAV28-201ENST00000557548 323 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 MIR3939-201ENST00000582614 106 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLRN1P58418 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.61□□□□□ -1.83
CLRN1P58418 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.61□□□□□ -1.83
CLRN1P58418 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CLRN1P58418 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLRN1P58418 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
CLRN1P58418 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CLRN1P58418 AC007785.2-201ENST00000598627 1916 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CLRN1P58418 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-37P-201ENST00000362692 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-11P-201ENST00000364234 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 SNORD14B-201ENST00000364533 90 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-7-201ENST00000364784 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNA5SP189-201ENST00000364920 115 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-8-201ENST00000365467 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC117470.1-201ENST00000381974 330 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-25P-201ENST00000383873 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-1-201ENST00000383898 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-48P-201ENST00000384161 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-36P-201ENST00000384172 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-4P-201ENST00000384205 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-5P-201ENST00000384238 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-3P-201ENST00000384314 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-16P-201ENST00000384385 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNY1P14-201ENST00000384426 108 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 Y_RNA.496-201ENST00000384444 101 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms