Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL442663.2-201ENST00000554385 511 ntBASIC3.8□□□□□ -1.8
PER3P56645 RN7SL703P-201ENST00000578485 302 ntBASIC3.8□□□□□ -1.8
PER3P56645 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PER3P56645 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.8□□□□□ -1.8
PER3P56645 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.8□□□□□ -1.8
PER3P56645 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.8□□□□□ -1.8
PER3P56645 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PER3P56645 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.8□□□□□ -1.8
PER3P56645 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.8□□□□□ -1.8
PER3P56645 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.8□□□□□ -1.8
PER3P56645 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.79□□□□□ -1.8
PER3P56645 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PER3P56645 MIR208A-201ENST00000362287 71 ntBASIC3.79□□□□□ -1.8
PER3P56645 SNORA71.3-201ENST00000362582 128 ntBASIC3.79□□□□□ -1.8
PER3P56645 SNORD3E-201ENST00000362899 217 ntBASIC3.79□□□□□ -1.8
PER3P56645 SNORA63-201ENST00000363450 132 ntBASIC3.79□□□□□ -1.8
PER3P56645 RNU6-128P-201ENST00000383976 107 ntBASIC3.79□□□□□ -1.8
PER3P56645 RNU6-474P-201ENST00000384243 107 ntBASIC3.79□□□□□ -1.8
PER3P56645 Y_RNA.480-201ENST00000384364 102 ntBASIC3.79□□□□□ -1.8
PER3P56645 MIR301A-201ENST00000385261 86 ntBASIC3.79□□□□□ -1.8
PER3P56645 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PER3P56645 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
PER3P56645 MIR1911-201ENST00000410783 80 ntBASIC3.79□□□□□ -1.8
PER3P56645 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.79□□□□□ -1.8
PER3P56645 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.79□□□□□ -1.8
PER3P56645 AC007919.1-201ENST00000429380 217 ntBASIC3.79□□□□□ -1.8
PER3P56645 SNAP23P1-201ENST00000433229 246 ntBASIC3.79□□□□□ -1.8
PER3P56645 AL359672.1-201ENST00000442302 409 ntBASIC3.79□□□□□ -1.8
PER3P56645 MRPS31P2-201ENST00000451581 518 ntBASIC3.79□□□□□ -1.8
PER3P56645 Y_RNA.639-201ENST00000458981 102 ntBASIC3.79□□□□□ -1.8
PER3P56645 KC877373.1-201ENST00000479066 408 ntBASIC3.79□□□□□ -1.8
PER3P56645 AC027575.1-201ENST00000481064 460 ntBASIC3.79□□□□□ -1.8
PER3P56645 AC079140.5-201ENST00000507882 310 ntBASIC3.79□□□□□ -1.8
PER3P56645 AC008716.1-201ENST00000511084 513 ntBASIC3.79□□□□□ -1.8
PER3P56645 FTH1P9-201ENST00000513251 355 ntBASIC3.79□□□□□ -1.8
PER3P56645 RNU6-143P-201ENST00000516942 93 ntBASIC3.79□□□□□ -1.8
PER3P56645 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.79□□□□□ -1.8
PER3P56645 AC025423.5-201ENST00000550230 219 ntBASIC3.79□□□□□ -1.8
PER3P56645 HSPE1P5-201ENST00000561489 272 ntBASIC3.79□□□□□ -1.8
PER3P56645 SNORA51-201ENST00000606420 132 ntBASIC3.79□□□□□ -1.8
PER3P56645 AC008568.2-201ENST00000623862 2313 ntBASIC3.79□□□□□ -1.8
PER3P56645 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
PER3P56645 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PER3P56645 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PER3P56645 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PER3P56645 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PER3P56645 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PER3P56645 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.78□□□□□ -1.8
PER3P56645 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
PER3P56645 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PER3P56645 MIR369-201ENST00000362155 70 ntBASIC3.78□□□□□ -1.8
PER3P56645 RNU6-1188P-201ENST00000363795 107 ntBASIC3.78□□□□□ -1.8
PER3P56645 Y_RNA.245-201ENST00000364493 95 ntBASIC3.78□□□□□ -1.8
PER3P56645 RNA5SP167-201ENST00000365461 116 ntBASIC3.78□□□□□ -1.8
PER3P56645 Y_RNA.482-201ENST00000384377 111 ntBASIC3.78□□□□□ -1.8
PER3P56645 RNU6-1179P-201ENST00000384667 107 ntBASIC3.78□□□□□ -1.8
PER3P56645 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PER3P56645 RNU6-954P-201ENST00000411355 107 ntBASIC3.78□□□□□ -1.8
PER3P56645 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.78□□□□□ -1.8
PER3P56645 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.78□□□□□ -1.8
PER3P56645 AL158156.1-201ENST00000422509 473 ntBASIC3.78□□□□□ -1.8
PER3P56645 AL353729.1-201ENST00000425044 720 ntBASIC3.78□□□□□ -1.8
PER3P56645 GPM6BP2-201ENST00000432046 144 ntBASIC3.78□□□□□ -1.8
PER3P56645 GOT2P5-201ENST00000433995 546 ntBASIC3.78□□□□□ -1.8
PER3P56645 PIGFP3-201ENST00000441918 722 ntBASIC3.78□□□□□ -1.8
PER3P56645 RPS3AP12-201ENST00000443616 753 ntBASIC3.78□□□□□ -1.8
PER3P56645 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.78□□□□□ -1.8
PER3P56645 GPM6BP1-201ENST00000446387 144 ntBASIC3.78□□□□□ -1.8
PER3P56645 PRSS3P4-201ENST00000453323 162 ntBASIC3.78□□□□□ -1.8
PER3P56645 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.78□□□□□ -1.8
PER3P56645 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.78□□□□□ -1.8
PER3P56645 AC130509.1-201ENST00000464158 433 ntBASIC3.78□□□□□ -1.8
PER3P56645 RN7SL585P-201ENST00000470538 280 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.78□□□□□ -1.8
PER3P56645 AC023141.12-201ENST00000512399 199 ntBASIC3.78□□□□□ -1.8
PER3P56645 RN7SKP289-201ENST00000517244 295 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC009902.1-201ENST00000519351 183 ntBASIC3.78□□□□□ -1.8
PER3P56645 TRMT10BP1-201ENST00000519377 943 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC087854.1-201ENST00000519706 414 ntBASIC3.78□□□□□ -1.8
PER3P56645 AP000889.1-201ENST00000530968 660 ntBASIC3.78□□□□□ -1.8
PER3P56645 OR5D17P-201ENST00000531492 978 ntBASIC3.78□□□□□ -1.8
PER3P56645 TRAV37-201ENST00000553906 342 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.78□□□□□ -1.8
PER3P56645 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.78□□□□□ -1.8
PER3P56645 AC005034.5-201ENST00000604219 466 ntBASIC3.78□□□□□ -1.8
PER3P56645 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.78□□□□□ -1.8
PER3P56645 Y_RNA.812-201ENST00000610788 101 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC019176.2-201ENST00000611579 315 ntBASIC3.78□□□□□ -1.8
PER3P56645 Y_RNA.784-201ENST00000613803 101 ntBASIC3.78□□□□□ -1.8
PER3P56645 Y_RNA.787-201ENST00000616522 101 ntBASIC3.78□□□□□ -1.8
PER3P56645 Y_RNA.780-201ENST00000617336 101 ntBASIC3.78□□□□□ -1.8
PER3P56645 Y_RNA.801-201ENST00000619005 101 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC098657.3-201ENST00000620434 263 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC090971.5-201ENST00000621102 293 ntBASIC3.78□□□□□ -1.8
PER3P56645 AC019278.1-201ENST00000623516 479 ntBASIC3.78□□□□□ -1.8
PER3P56645 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PER3P56645 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.78□□□□□ -1.8
PER3P56645 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms