Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
NUBP1P53384 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.94□□□□□ -1.46
NUBP1P53384 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.94□□□□□ -1.46
NUBP1P53384 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.94□□□□□ -1.46
NUBP1P53384 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.94□□□□□ -1.46
NUBP1P53384 Y_RNA.49-201ENST00000362714 112 ntBASIC5.94□□□□□ -1.46
NUBP1P53384 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NUBP1P53384 MRPL53P1-201ENST00000414323 319 ntBASIC5.94□□□□□ -1.46
NUBP1P53384 AC109327.2-201ENST00000448339 378 ntBASIC5.94□□□□□ -1.46
NUBP1P53384 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.94□□□□□ -1.46
NUBP1P53384 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 AL021707.8-201ENST00000609428 183 ntBASIC5.94□□□□□ -1.46
NUBP1P53384 AC112484.5-201ENST00000624189 228 ntBASIC5.94□□□□□ -1.46
NUBP1P53384 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NUBP1P53384 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
NUBP1P53384 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NUBP1P53384 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 OLMALINC-203ENST00000641087 3779 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 AC004944.1-201ENST00000517807 3059 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.93□□□□□ -1.46
NUBP1P53384 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.93□□□□□ -1.46
NUBP1P53384 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
NUBP1P53384 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NUBP1P53384 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NUBP1P53384 RNU6-271P-201ENST00000363858 105 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 MIR570-201ENST00000384917 97 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 RNA5SP136-201ENST00000410906 107 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.93□□□□□ -1.46
NUBP1P53384 RN7SL51P-201ENST00000468230 285 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 AC107626.1-201ENST00000471084 183 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 RNU6-1073P-201ENST00000517182 106 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 MIR3199-2-201ENST00000636243 86 ntBASIC5.93□□□□□ -1.46
NUBP1P53384 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.93□□□□□ -1.46
NUBP1P53384 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.93□□□□□ -1.46
NUBP1P53384 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
NUBP1P53384 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.93□□□□□ -1.46
NUBP1P53384 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.93□□□□□ -1.46
NUBP1P53384 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUBP1P53384 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.92□□□□□ -1.46
NUBP1P53384 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NUBP1P53384 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 AC010266.2-201ENST00000564741 3255 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
NUBP1P53384 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.92□□□□□ -1.46
NUBP1P53384 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.92□□□□□ -1.46
NUBP1P53384 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
NUBP1P53384 Y_RNA.124-201ENST00000363339 93 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 SNORA51.10-201ENST00000384418 136 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NUBP1P53384 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.92□□□□□ -1.46
NUBP1P53384 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
NUBP1P53384 RN7SKP12-201ENST00000516275 143 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 RNU6-1146P-201ENST00000516282 102 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 MIR4436B2-201ENST00000581415 91 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 MIR4436B1-201ENST00000583272 91 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.92□□□□□ -1.46
NUBP1P53384 AL442128.1-201ENST00000615151 90 ntBASIC5.92□□□□□ -1.46
NUBP1P53384 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUBP1P53384 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NUBP1P53384 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUBP1P53384 AL662795.2-201ENST00000624252 3706 ntBASIC5.91□□□□□ -1.46
NUBP1P53384 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUBP1P53384 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NUBP1P53384 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUBP1P53384 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.91□□□□□ -1.46
NUBP1P53384 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
NUBP1P53384 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUBP1P53384 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.91□□□□□ -1.46
NUBP1P53384 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUBP1P53384 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.91□□□□□ -1.46
NUBP1P53384 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.91□□□□□ -1.46
NUBP1P53384 Y_RNA.52-201ENST00000362760 96 ntBASIC5.91□□□□□ -1.46
NUBP1P53384 RNA5SP455-201ENST00000365190 119 ntBASIC5.91□□□□□ -1.46
NUBP1P53384 SNORD116-13-201ENST00000384408 92 ntBASIC5.91□□□□□ -1.46
NUBP1P53384 RNA5SP127-201ENST00000411051 133 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms