Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL591416.1-201ENST00000404015 867 ntBASIC3.62□□□□□ -1.83
NEK3P51956 CIR1P3-201ENST00000405137 479 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AL590002.1-201ENST00000406554 418 ntBASIC3.62□□□□□ -1.83
NEK3P51956 ZNF885P-201ENST00000420174 1098 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AL627311.1-201ENST00000431514 115 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AC073063.1-201ENST00000434352 607 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.62□□□□□ -1.83
NEK3P51956 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
NEK3P51956 HMGN2P10-201ENST00000448085 265 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AC010401.1-201ENST00000463867 348 ntBASIC3.62□□□□□ -1.83
NEK3P51956 RPL7P49-201ENST00000471402 708 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AC022493.1-201ENST00000492984 337 ntBASIC3.62□□□□□ -1.83
NEK3P51956 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.62□□□□□ -1.83
NEK3P51956 AC112206.3-201ENST00000514578 389 ntBASIC3.62□□□□□ -1.83
NEK3P51956 SNORD19.2-201ENST00000516978 73 ntBASIC3.62□□□□□ -1.83
NEK3P51956 HIF1AP1-201ENST00000553642 175 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.62□□□□□ -1.83
NEK3P51956 AC234778.2-201ENST00000566241 354 ntBASIC3.62□□□□□ -1.83
NEK3P51956 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
NEK3P51956 BNIP3P30-201ENST00000601184 574 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AL162413.1-201ENST00000603198 110 ntBASIC3.62□□□□□ -1.83
NEK3P51956 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.62□□□□□ -1.83
NEK3P51956 MIR3199-2-201ENST00000636243 86 ntBASIC3.62□□□□□ -1.83
NEK3P51956 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEK3P51956 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.62□□□□□ -1.83
NEK3P51956 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEK3P51956 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.61□□□□□ -1.83
NEK3P51956 MTCO1P12-201ENST00000414273 1543 ntBASIC3.61□□□□□ -1.83
NEK3P51956 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEK3P51956 SNORD46.1-201ENST00000364139 104 ntBASIC3.61□□□□□ -1.83
NEK3P51956 SNORA69-201ENST00000383895 132 ntBASIC3.61□□□□□ -1.83
NEK3P51956 Y_RNA.623-201ENST00000411128 95 ntBASIC3.61□□□□□ -1.83
NEK3P51956 AC006946.1-201ENST00000429106 328 ntBASIC3.61□□□□□ -1.83
NEK3P51956 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.61□□□□□ -1.83
NEK3P51956 RN7SL293P-201ENST00000481765 281 ntBASIC3.61□□□□□ -1.83
NEK3P51956 RPS29P20-201ENST00000489592 171 ntBASIC3.61□□□□□ -1.83
NEK3P51956 RNU6-579P-201ENST00000516879 102 ntBASIC3.61□□□□□ -1.83
NEK3P51956 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.61□□□□□ -1.83
NEK3P51956 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.61□□□□□ -1.83
NEK3P51956 LINC00933-203ENST00000559812 219 ntBASIC3.61□□□□□ -1.83
NEK3P51956 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.61□□□□□ -1.83
NEK3P51956 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.61□□□□□ -1.83
NEK3P51956 DEFB131E-202ENST00000602581 683 ntBASIC3.61□□□□□ -1.83
NEK3P51956 AF250324.2-201ENST00000608299 610 ntBASIC3.61□□□□□ -1.83
NEK3P51956 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NEK3P51956 AC110079.1-202ENST00000635213 138 ntBASIC3.61□□□□□ -1.83
NEK3P51956 MIR1321-201ENST00000637766 79 ntBASIC3.61□□□□□ -1.83
NEK3P51956 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEK3P51956 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.61□□□□□ -1.83
NEK3P51956 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NEK3P51956 AL079305.1-201ENST00000623159 3008 ntBASIC3.6□□□□□ -1.83
NEK3P51956 ZNF519P1-201ENST00000449011 1626 ntBASIC3.6□□□□□ -1.83
NEK3P51956 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.6□□□□□ -1.83
NEK3P51956 AP003122.5-201ENST00000527668 3766 ntBASIC3.6□□□□□ -1.83
NEK3P51956 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEK3P51956 MIR578-201ENST00000384828 96 ntBASIC3.6□□□□□ -1.83
NEK3P51956 MIR183-201ENST00000384958 110 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AL139039.1-201ENST00000401900 692 ntBASIC3.6□□□□□ -1.83
NEK3P51956 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.6□□□□□ -1.83
NEK3P51956 FCF1P9-201ENST00000412546 282 ntBASIC3.6□□□□□ -1.83
NEK3P51956 RPS15AP6-201ENST00000420703 385 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AC007560.1-201ENST00000426912 237 ntBASIC3.6□□□□□ -1.83
NEK3P51956 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
NEK3P51956 SEPT14P3-201ENST00000439401 183 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AL732372.2-207ENST00000445840 183 ntBASIC3.6□□□□□ -1.83
NEK3P51956 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AL360271.2-201ENST00000447710 161 ntBASIC3.6□□□□□ -1.83
NEK3P51956 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.6□□□□□ -1.83
NEK3P51956 PRSS3P4-201ENST00000453323 162 ntBASIC3.6□□□□□ -1.83
NEK3P51956 SEPT14P2-201ENST00000453405 183 ntBASIC3.6□□□□□ -1.83
NEK3P51956 CACYBPP2-201ENST00000453625 678 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.6□□□□□ -1.83
NEK3P51956 RPS4XP2-201ENST00000458402 793 ntBASIC3.6□□□□□ -1.83
NEK3P51956 RPS27P26-201ENST00000494583 239 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AC093663.1-201ENST00000497190 394 ntBASIC3.6□□□□□ -1.83
NEK3P51956 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.6□□□□□ -1.83
NEK3P51956 MTND4LP22-201ENST00000508209 276 ntBASIC3.6□□□□□ -1.83
NEK3P51956 SEPT14P4-201ENST00000513445 186 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.6□□□□□ -1.83
NEK3P51956 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
NEK3P51956 RNU6-835P-201ENST00000516974 104 ntBASIC3.6□□□□□ -1.83
NEK3P51956 FO082796.1-201ENST00000523795 183 ntBASIC3.6□□□□□ -1.83
NEK3P51956 OR5AQ1P-201ENST00000527596 927 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.6□□□□□ -1.83
NEK3P51956 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.6□□□□□ -1.83
NEK3P51956 AC021739.1-201ENST00000559631 174 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AC010653.1-201ENST00000571108 881 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AC025165.5-201ENST00000602802 578 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AL133393.1-201ENST00000603277 287 ntBASIC3.6□□□□□ -1.83
NEK3P51956 MIR6134-201ENST00000617606 109 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.6□□□□□ -1.83
NEK3P51956 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
NEK3P51956 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.6□□□□□ -1.83
NEK3P51956 AC068137.3-201ENST00000639191 341 ntBASIC3.6□□□□□ -1.83
NEK3P51956 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.6□□□□□ -1.83
NEK3P51956 AC073869.6-201ENST00000640656 341 ntBASIC3.6□□□□□ -1.83
NEK3P51956 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEK3P51956 ASNSP3-201ENST00000451989 1306 ntBASIC3.6□□□□□ -1.83
NEK3P51956 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms