Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 TDGF1P1-201ENST00000445734 527 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.84□□□□□ -1.63
RNF144AP50876 MLLT10P2-201ENST00000506434 249 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF144AP50876 RNU6-1256P-201ENST00000516539 103 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 RNA5SP165-201ENST00000517142 115 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF144AP50876 MIR4489-201ENST00000578869 62 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 AL590392.1-201ENST00000604960 446 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 AC022441.3-201ENST00000605737 136 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF144AP50876 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF144AP50876 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF144AP50876 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF144AP50876 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF144AP50876 MAPK10-349ENST00000641767 3661 ntBASIC4.84□□□□□ -1.64
RNF144AP50876 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RNF144AP50876 MUC2-202ENST00000613187 4845 ntBASIC4.84□□□□□ -1.64
RNF144AP50876 AC092593.1-201ENST00000515413 1815 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF144AP50876 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
RNF144AP50876 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF144AP50876 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF144AP50876 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF144AP50876 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RNF144AP50876 Y_RNA.121-201ENST00000363309 113 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 Y_RNA.218-201ENST00000364218 104 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 RNA5SP132-201ENST00000364725 118 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 SNORA72.2-201ENST00000365028 127 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 RNU6-159P-201ENST00000391080 106 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF144AP50876 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF144AP50876 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF144AP50876 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF144AP50876 AC091179.1-201ENST00000461606 579 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 RNU6-191P-201ENST00000516295 94 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF144AP50876 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF144AP50876 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF144AP50876 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
RNF144AP50876 AC000123.3-201ENST00000624029 4975 ntBASIC4.83□□□□□ -1.64
RNF144AP50876 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF144AP50876 AC007390.2-201ENST00000606229 3803 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF144AP50876 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF144AP50876 U3.2-201ENST00000362981 210 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 RN7SKP160-201ENST00000363804 340 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 RNU6-142P-201ENST00000384019 107 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF144AP50876 RNU6-239P-201ENST00000390990 99 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 AL138785.1-201ENST00000425821 331 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 AC010154.1-201ENST00000425857 269 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 Z82210.1-201ENST00000440037 231 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 RN7SL814P-201ENST00000487715 300 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 AC020890.1-201ENST00000491837 504 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 RN7SL447P-201ENST00000494711 245 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF144AP50876 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF144AP50876 AC107016.1-201ENST00000550463 337 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF144AP50876 AC011487.3-201ENST00000593607 453 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF144AP50876 MIR6839-201ENST00000620425 113 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF144AP50876 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RNF144AP50876 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF144AP50876 AC099654.2-201ENST00000433031 1980 ntBASIC4.82□□□□□ -1.64
RNF144AP50876 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF144AP50876 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
RNF144AP50876 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF144AP50876 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF144AP50876 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF144AP50876 AC026951.1-201ENST00000559530 2459 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RNF144AP50876 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
RNF144AP50876 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RNF144AP50876 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms