Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC010133.1-201ENST00000615809 842 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.03□□□□□ -1.92
CLK1P49759 AC091953.2-201ENST00000623979 160 ntBASIC3.03□□□□□ -1.92
CLK1P49759 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.03□□□□□ -1.92
CLK1P49759 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.03□□□□□ -1.92
CLK1P49759 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CLK1P49759 MTND5P19-201ENST00000424872 1794 ntBASIC3.02□□□□□ -1.93
CLK1P49759 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK1P49759 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLK1P49759 Y_RNA.1-201ENST00000352915 104 ntBASIC3.02□□□□□ -1.93
CLK1P49759 SNORA38-201ENST00000363946 132 ntBASIC3.02□□□□□ -1.93
CLK1P49759 RNU6-1090P-201ENST00000364065 94 ntBASIC3.02□□□□□ -1.93
CLK1P49759 RNU1-33P-201ENST00000364249 162 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLK1P49759 RNU6-754P-201ENST00000391166 107 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.02□□□□□ -1.93
CLK1P49759 TIMM9P3-201ENST00000428659 274 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC133104.1-201ENST00000429100 218 ntBASIC3.02□□□□□ -1.93
CLK1P49759 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.02□□□□□ -1.93
CLK1P49759 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.02□□□□□ -1.93
CLK1P49759 AC108734.1-201ENST00000439549 399 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.02□□□□□ -1.93
CLK1P49759 AL671855.1-201ENST00000446875 1203 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC132479.1-201ENST00000449160 144 ntBASIC3.02□□□□□ -1.93
CLK1P49759 UQCRHP3-201ENST00000451503 251 ntBASIC3.02□□□□□ -1.93
CLK1P49759 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 RPL21P13-201ENST00000488305 481 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.02□□□□□ -1.93
CLK1P49759 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.02□□□□□ -1.93
CLK1P49759 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLK1P49759 HMGB1P33-201ENST00000563485 527 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AL356432.3-201ENST00000568952 465 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC009163.5-201ENST00000575421 637 ntBASIC3.02□□□□□ -1.93
CLK1P49759 MIR4444-1-201ENST00000581696 74 ntBASIC3.02□□□□□ -1.93
CLK1P49759 MIR4444-2-201ENST00000584390 74 ntBASIC3.02□□□□□ -1.93
CLK1P49759 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLK1P49759 SDR42E1P2-201ENST00000614861 481 ntBASIC3.02□□□□□ -1.93
CLK1P49759 MIR6075-201ENST00000620782 95 ntBASIC3.02□□□□□ -1.93
CLK1P49759 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 DUXAP9-208ENST00000622815 614 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.02□□□□□ -1.93
CLK1P49759 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.02□□□□□ -1.93
CLK1P49759 AC010149.2-201ENST00000637608 315 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC099654.14-201ENST00000638599 341 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC093831.2-201ENST00000624393 3427 ntBASIC3.02□□□□□ -1.93
CLK1P49759 AC010329.5-201ENST00000623497 2174 ntBASIC3.02□□□□□ -1.93
CLK1P49759 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK1P49759 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLK1P49759 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLK1P49759 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.02□□□□□ -1.93
CLK1P49759 AL353743.1-202ENST00000431724 1695 ntBASIC3.01□□□□□ -1.93
CLK1P49759 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.01□□□□□ -1.93
CLK1P49759 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLK1P49759 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLK1P49759 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLK1P49759 FTLP6-201ENST00000355274 422 ntBASIC3.01□□□□□ -1.93
CLK1P49759 RNU6-181P-201ENST00000363225 107 ntBASIC3.01□□□□□ -1.93
CLK1P49759 Y_RNA.159-201ENST00000363674 87 ntBASIC3.01□□□□□ -1.93
CLK1P49759 Y_RNA.409-201ENST00000383990 98 ntBASIC3.01□□□□□ -1.93
CLK1P49759 RNU6-432P-201ENST00000384196 109 ntBASIC3.01□□□□□ -1.93
CLK1P49759 MIR7-3-201ENST00000384898 110 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AC023141.4-201ENST00000412031 328 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK1P49759 AC096649.2-201ENST00000416186 393 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AL353193.1-201ENST00000421444 268 ntBASIC3.01□□□□□ -1.93
CLK1P49759 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK1P49759 NFU1P2-201ENST00000448700 469 ntBASIC3.01□□□□□ -1.93
CLK1P49759 RPL31P58-201ENST00000469001 379 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK1P49759 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.01□□□□□ -1.93
CLK1P49759 AC055855.1-201ENST00000489563 579 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AL160314.1-201ENST00000490836 438 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AC074344.1-201ENST00000512823 224 ntBASIC3.01□□□□□ -1.93
CLK1P49759 RNU6-445P-201ENST00000516949 107 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.01□□□□□ -1.93
CLK1P49759 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.01□□□□□ -1.93
CLK1P49759 AC011611.1-201ENST00000552179 197 ntBASIC3.01□□□□□ -1.93
CLK1P49759 NCAPGP2-201ENST00000557911 754 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.01□□□□□ -1.93
CLK1P49759 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.01□□□□□ -1.93
CLK1P49759 AC008277.2-201ENST00000605196 797 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AC073657.2-201ENST00000605661 303 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AC017083.3-201ENST00000609955 700 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AL359198.2-201ENST00000611836 194 ntBASIC3.01□□□□□ -1.93
CLK1P49759 uc_338.1-201ENST00000612113 180 ntBASIC3.01□□□□□ -1.93
CLK1P49759 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
CLK1P49759 AL008636.1-201ENST00000625038 1018 ntBASIC3.01□□□□□ -1.93
CLK1P49759 FO624990.1-201ENST00000636373 85 ntBASIC3.01□□□□□ -1.93
CLK1P49759 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.01□□□□□ -1.93
CLK1P49759 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.01□□□□□ -1.93
CLK1P49759 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.01□□□□□ -1.93
CLK1P49759 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLK1P49759 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLK1P49759 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms