Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL354950.2-201ENST00000617939 290 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 DUXAP9-208ENST00000622815 614 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-1P43699 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-1P43699 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NKX2-1P43699 AC092435.3-201ENST00000565538 3654 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 RNU6-778P-201ENST00000363269 103 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NKX2-1P43699 RNU6-1029P-201ENST00000384109 107 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 SAR1AP2-201ENST00000392696 594 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 RNU2-9P-201ENST00000410194 145 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 RNU6-373P-201ENST00000411247 98 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 USP9YP6-201ENST00000413550 854 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.74□□□□□ -1.97
NKX2-1P43699 HMGN2P30-201ENST00000423237 256 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX2-1P43699 AC093106.2-201ENST00000428212 385 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX2-1P43699 RPL36AP53-201ENST00000432891 316 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 GOT2P5-201ENST00000433995 546 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 BRK1P2-201ENST00000442875 223 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC115115.1-201ENST00000449927 248 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AL118520.1-201ENST00000450770 291 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.74□□□□□ -1.97
NKX2-1P43699 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.74□□□□□ -1.97
NKX2-1P43699 MTCYBP18-201ENST00000501056 747 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC092436.1-201ENST00000506450 503 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 PRDX4P1-201ENST00000507189 574 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC114786.4-201ENST00000508771 728 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.74□□□□□ -1.97
NKX2-1P43699 RNU1-143P-201ENST00000516296 146 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 Y_RNA.689-201ENST00000516589 107 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 RNU6-703P-201ENST00000516946 107 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 SUB1P1-201ENST00000524415 382 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AP003122.3-201ENST00000526316 255 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC084851.1-201ENST00000529105 249 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX2-1P43699 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.74□□□□□ -1.97
NKX2-1P43699 AC068135.2-201ENST00000569293 1028 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC015917.1-201ENST00000579654 510 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 MIR3941-201ENST00000582572 103 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 VN1R85P-201ENST00000601587 426 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 NRBF2P5-201ENST00000603087 788 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.74□□□□□ -1.97
NKX2-1P43699 NUTF2P8-201ENST00000604593 363 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 AC012468.1-201ENST00000604888 430 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 U1.23-201ENST00000610293 146 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NKX2-1P43699 RNU1-68P-201ENST00000615382 146 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 SNORD39.4-201ENST00000620099 78 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.74□□□□□ -1.97
NKX2-1P43699 U1.39-201ENST00000621562 146 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 YWHAEP7-203ENST00000622054 312 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NKX2-1P43699 AC004520.1-201ENST00000608362 1413 ntBASIC2.74□□□□□ -1.97
NKX2-1P43699 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
NKX2-1P43699 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.74□□□□□ -1.97
NKX2-1P43699 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX2-1P43699 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX2-1P43699 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
NKX2-1P43699 RNU1-105P-201ENST00000363470 161 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 RNU6-82P-201ENST00000363970 107 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 SNORA62.1-201ENST00000364287 154 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 RNU6-1027P-201ENST00000383998 107 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 MIR514A2-201ENST00000385131 88 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 MIR514A3-201ENST00000385132 88 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 RPL21P3-201ENST00000395517 478 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 OR6C66P-201ENST00000414917 930 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 MTND1P23-201ENST00000416931 372 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 ARL5AP1-201ENST00000418991 388 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.73□□□□□ -1.97
NKX2-1P43699 AL592045.1-201ENST00000429867 352 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 GTF2IP20-201ENST00000431663 360 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 WASF1P1-201ENST00000447560 1131 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 RPL37P4-201ENST00000448908 268 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.73□□□□□ -1.97
NKX2-1P43699 ELOCP23-201ENST00000452014 332 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 RPL12P25-201ENST00000455592 494 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 RNU7-180P-201ENST00000459240 63 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AC146507.2-201ENST00000460608 476 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AC006483.1-201ENST00000487308 313 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 HMGN1P11-201ENST00000508668 303 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 RNA5SP503-201ENST00000517047 117 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 SCARNA20.6-201ENST00000517251 106 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.73□□□□□ -1.97
NKX2-1P43699 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.73□□□□□ -1.97
NKX2-1P43699 PSMA2P1-201ENST00000526365 646 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 MTND1P35-201ENST00000526739 508 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AC103843.2-201ENST00000530523 682 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 OR5AL2P-201ENST00000532185 920 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.73□□□□□ -1.97
NKX2-1P43699 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.73□□□□□ -1.97
NKX2-1P43699 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.73□□□□□ -1.97
NKX2-1P43699 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.73□□□□□ -1.97
NKX2-1P43699 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.73□□□□□ -1.97
NKX2-1P43699 MIR1273C-201ENST00000578669 77 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
NKX2-1P43699 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.73□□□□□ -1.97
NKX2-1P43699 AP000907.4-201ENST00000604143 237 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms