Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CUL1P1-201ENST00000509510 2425 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN9P43378 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
PTPN9P43378 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN9P43378 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN9P43378 AL158156.1-201ENST00000422509 473 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AC092047.1-201ENST00000424997 240 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 MTND1P2-201ENST00000430604 821 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AL591704.1-201ENST00000432574 275 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AL591212.2-201ENST00000433923 257 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 SNRPEP4-201ENST00000435815 279 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 RPL23AP22-201ENST00000437556 453 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 Z82210.1-201ENST00000440037 231 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 MTCO3P18-201ENST00000440206 761 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPN9P43378 RPL7P5-201ENST00000471472 736 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 RPL23AP11-201ENST00000475260 469 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AC109925.1-201ENST00000478069 331 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 RPS29P25-201ENST00000481709 171 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 FAM92A1P2-202ENST00000504766 877 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN9P43378 AC104806.1-201ENST00000508720 308 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 RNA5SP217-201ENST00000515959 91 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 SNORD60.2-201ENST00000516883 86 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN9P43378 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN9P43378 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN9P43378 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN9P43378 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN9P43378 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPN9P43378 AC022893.3-201ENST00000607665 437 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 AL136164.4-201ENST00000625013 2135 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN9P43378 AL359693.1-201ENST00000614959 2407 ntBASIC3.33□□□□□ -1.88
PTPN9P43378 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PTPN9P43378 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN9P43378 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN9P43378 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN9P43378 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PTPN9P43378 UBE2L2-201ENST00000254302 429 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 RNU6-552P-201ENST00000362869 119 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 RNU6-805P-201ENST00000365643 106 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN9P43378 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 Y_RNA.534-201ENST00000384599 112 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 MIR34B-201ENST00000385076 84 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 U3.19-201ENST00000390893 196 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 RNU6-903P-201ENST00000391270 109 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AL591416.1-201ENST00000404015 867 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 RNA5SP118-201ENST00000410385 109 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 RNU4-47P-201ENST00000410876 114 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 AL139415.2-201ENST00000431968 163 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPN9P43378 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 AC091179.1-201ENST00000461606 579 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 RPL31P58-201ENST00000469001 379 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 RPL7P49-201ENST00000471402 708 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPN9P43378 AC092436.1-201ENST00000506450 503 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN9P43378 TTC39CP1-201ENST00000512513 755 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 Y_RNA.689-201ENST00000516589 107 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 MTND1P35-201ENST00000526739 508 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN9P43378 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN9P43378 AC068135.2-201ENST00000569293 1028 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN9P43378 NRBF2P5-201ENST00000603087 788 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC098826.3-201ENST00000603823 466 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AL161798.1-201ENST00000604630 131 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC069200.1-201ENST00000609511 323 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AC009570.1-201ENST00000609599 745 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 DISC2.1-201ENST00000612827 205 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN9P43378 AL049641.1-201ENST00000441055 1948 ntBASIC3.32□□□□□ -1.88
PTPN9P43378 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN9P43378 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN9P43378 TPTE2P4-201ENST00000258589 1605 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 SNORA63.1-201ENST00000362493 131 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNU6-1287P-201ENST00000362914 107 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNU6-451P-201ENST00000362921 107 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNU6-1283P-201ENST00000365314 105 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 Y_RNA.381-201ENST00000365666 102 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNU6-877P-201ENST00000383868 107 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNU6-1060P-201ENST00000384664 107 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN9P43378 RNA5SP120-201ENST00000410900 112 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 RNU6-193P-201ENST00000410977 107 ntBASIC3.31□□□□□ -1.88
PTPN9P43378 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN9P43378 OR6C66P-201ENST00000414917 930 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms