Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.2□□□□□ -1.9
USP8P40818 snoU13.22-201ENST00000459428 104 ntBASIC3.2□□□□□ -1.9
USP8P40818 RPL21P41-201ENST00000459863 264 ntBASIC3.2□□□□□ -1.9
USP8P40818 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP8P40818 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.2□□□□□ -1.9
USP8P40818 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.2□□□□□ -1.9
USP8P40818 RNU7-51P-201ENST00000516560 62 ntBASIC3.2□□□□□ -1.9
USP8P40818 Y_RNA.693-201ENST00000516641 110 ntBASIC3.2□□□□□ -1.9
USP8P40818 RNU6-840P-201ENST00000517275 65 ntBASIC3.2□□□□□ -1.9
USP8P40818 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
USP8P40818 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
USP8P40818 SNRPGP16-201ENST00000533275 226 ntBASIC3.2□□□□□ -1.9
USP8P40818 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
USP8P40818 ELOCP31-201ENST00000540463 467 ntBASIC3.2□□□□□ -1.9
USP8P40818 AC034105.3-201ENST00000565294 442 ntBASIC3.2□□□□□ -1.9
USP8P40818 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.2□□□□□ -1.9
USP8P40818 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.2□□□□□ -1.9
USP8P40818 DPPA3P3-201ENST00000603842 430 ntBASIC3.2□□□□□ -1.9
USP8P40818 AC012468.1-201ENST00000604888 430 ntBASIC3.2□□□□□ -1.9
USP8P40818 AC093788.1-201ENST00000609356 927 ntBASIC3.2□□□□□ -1.9
USP8P40818 AC017083.3-201ENST00000609955 700 ntBASIC3.2□□□□□ -1.9
USP8P40818 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP8P40818 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.2□□□□□ -1.9
USP8P40818 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.2□□□□□ -1.9
USP8P40818 AC009812.4-201ENST00000569134 1805 ntBASIC3.2□□□□□ -1.9
USP8P40818 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP8P40818 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.2□□□□□ -1.9
USP8P40818 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
USP8P40818 AC093536.2-201ENST00000565257 1406 ntBASIC3.19□□□□□ -1.9
USP8P40818 TAB3P1-202ENST00000452645 1634 ntBASIC3.19□□□□□ -1.9
USP8P40818 HSPE1P11-201ENST00000339579 310 ntBASIC3.19□□□□□ -1.9
USP8P40818 Y_RNA.402-201ENST00000383972 102 ntBASIC3.19□□□□□ -1.9
USP8P40818 RNU6-76P-201ENST00000384060 104 ntBASIC3.19□□□□□ -1.9
USP8P40818 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
USP8P40818 UBE2V1P2-201ENST00000397758 440 ntBASIC3.19□□□□□ -1.9
USP8P40818 RPS4XP8-201ENST00000402039 771 ntBASIC3.19□□□□□ -1.9
USP8P40818 AL359634.1-202ENST00000404721 284 ntBASIC3.19□□□□□ -1.9
USP8P40818 USP9YP27-201ENST00000418455 438 ntBASIC3.19□□□□□ -1.9
USP8P40818 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP8P40818 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 MTCO1P20-201ENST00000425366 358 ntBASIC3.19□□□□□ -1.9
USP8P40818 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 MTATP6P16-201ENST00000434543 526 ntBASIC3.19□□□□□ -1.9
USP8P40818 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 AL121871.1-201ENST00000443413 436 ntBASIC3.19□□□□□ -1.9
USP8P40818 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP8P40818 RPL23AP20-201ENST00000447965 421 ntBASIC3.19□□□□□ -1.9
USP8P40818 FGF7P6-202ENST00000451282 293 ntBASIC3.19□□□□□ -1.9
USP8P40818 AC006512.1-201ENST00000468816 291 ntBASIC3.19□□□□□ -1.9
USP8P40818 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 RPS29P2-201ENST00000479278 136 ntBASIC3.19□□□□□ -1.9
USP8P40818 AC069439.1-201ENST00000494739 167 ntBASIC3.19□□□□□ -1.9
USP8P40818 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.19□□□□□ -1.9
USP8P40818 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP8P40818 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.19□□□□□ -1.9
USP8P40818 ERHP1-201ENST00000523006 310 ntBASIC3.19□□□□□ -1.9
USP8P40818 MTND1P35-201ENST00000526739 508 ntBASIC3.19□□□□□ -1.9
USP8P40818 AP001646.1-201ENST00000527936 915 ntBASIC3.19□□□□□ -1.9
USP8P40818 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 AC025678.1-201ENST00000567861 338 ntBASIC3.19□□□□□ -1.9
USP8P40818 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.19□□□□□ -1.9
USP8P40818 AC007621.1-201ENST00000604544 437 ntBASIC3.19□□□□□ -1.9
USP8P40818 AC012443.1-201ENST00000605605 231 ntBASIC3.19□□□□□ -1.9
USP8P40818 AP002360.4-201ENST00000606980 481 ntBASIC3.19□□□□□ -1.9
USP8P40818 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 AL589994.2-201ENST00000621124 579 ntBASIC3.19□□□□□ -1.9
USP8P40818 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USP8P40818 AL161431.1-201ENST00000618966 4205 ntBASIC3.19□□□□□ -1.9
USP8P40818 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.19□□□□□ -1.9
USP8P40818 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.18□□□□□ -1.9
USP8P40818 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP8P40818 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP8P40818 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
USP8P40818 RNU5E-6P-201ENST00000365574 115 ntBASIC3.18□□□□□ -1.9
USP8P40818 Y_RNA.390-201ENST00000383932 102 ntBASIC3.18□□□□□ -1.9
USP8P40818 RNU6-1158P-201ENST00000391167 107 ntBASIC3.18□□□□□ -1.9
USP8P40818 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.18□□□□□ -1.9
USP8P40818 MIR1277-201ENST00000408536 78 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.18□□□□□ -1.9
USP8P40818 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP8P40818 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.18□□□□□ -1.9
USP8P40818 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.18□□□□□ -1.9
USP8P40818 AL606489.2-201ENST00000433886 234 ntBASIC3.18□□□□□ -1.9
USP8P40818 RPS20P5-201ENST00000434808 360 ntBASIC3.18□□□□□ -1.9
USP8P40818 RPL36AP6-201ENST00000435770 321 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC079781.2-201ENST00000446424 169 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.18□□□□□ -1.9
USP8P40818 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.18□□□□□ -1.9
USP8P40818 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.18□□□□□ -1.9
USP8P40818 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
USP8P40818 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.18□□□□□ -1.9
USP8P40818 RPS29P15-201ENST00000458329 171 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms