Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HMGB1P9-201ENST00000429856 646 ntBASIC2.22□□□□□ -2.05
RORAP35398 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.22□□□□□ -2.05
RORAP35398 AL139415.2-201ENST00000431968 163 ntBASIC2.22□□□□□ -2.05
RORAP35398 UBE2FP3-201ENST00000436366 524 ntBASIC2.22□□□□□ -2.05
RORAP35398 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.22□□□□□ -2.05
RORAP35398 ELOCP7-201ENST00000439968 331 ntBASIC2.22□□□□□ -2.05
RORAP35398 AL606662.1-201ENST00000445763 553 ntBASIC2.22□□□□□ -2.05
RORAP35398 AL606517.1-201ENST00000446914 387 ntBASIC2.22□□□□□ -2.05
RORAP35398 CECR9-201ENST00000453421 199 ntBASIC2.22□□□□□ -2.05
RORAP35398 RPS27AP10-201ENST00000496103 208 ntBASIC2.22□□□□□ -2.05
RORAP35398 RPS29P21-201ENST00000496272 170 ntBASIC2.22□□□□□ -2.05
RORAP35398 AC034244.1-201ENST00000507687 207 ntBASIC2.22□□□□□ -2.05
RORAP35398 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.22□□□□□ -2.05
RORAP35398 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.22□□□□□ -2.05
RORAP35398 RN7SKP258-201ENST00000517151 304 ntBASIC2.22□□□□□ -2.05
RORAP35398 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.22□□□□□ -2.05
RORAP35398 AP005902.1-201ENST00000521358 186 ntBASIC2.22□□□□□ -2.05
RORAP35398 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.22□□□□□ -2.05
RORAP35398 MIR4307-201ENST00000582802 84 ntBASIC2.22□□□□□ -2.05
RORAP35398 MIR4999-201ENST00000585029 91 ntBASIC2.22□□□□□ -2.05
RORAP35398 AL031281.1-201ENST00000604049 488 ntBASIC2.22□□□□□ -2.05
RORAP35398 AC018714.1-201ENST00000605028 208 ntBASIC2.22□□□□□ -2.05
RORAP35398 AC004805.2-201ENST00000605382 482 ntBASIC2.22□□□□□ -2.05
RORAP35398 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.22□□□□□ -2.05
RORAP35398 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
RORAP35398 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.22□□□□□ -2.05
RORAP35398 AC004520.1-201ENST00000608362 1413 ntBASIC2.22□□□□□ -2.05
RORAP35398 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RORAP35398 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RORAP35398 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
RORAP35398 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RORAP35398 MTND5P29-201ENST00000458676 1807 ntBASIC2.21□□□□□ -2.05
RORAP35398 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.21□□□□□ -2.06
RORAP35398 Y_RNA.97-201ENST00000363094 102 ntBASIC2.21□□□□□ -2.06
RORAP35398 RNU6-778P-201ENST00000363269 103 ntBASIC2.21□□□□□ -2.06
RORAP35398 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RORAP35398 RNU6-750P-201ENST00000390946 107 ntBASIC2.21□□□□□ -2.06
RORAP35398 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.21□□□□□ -2.06
RORAP35398 BPY2DP-201ENST00000422208 265 ntBASIC2.21□□□□□ -2.06
RORAP35398 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.21□□□□□ -2.06
RORAP35398 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.21□□□□□ -2.06
RORAP35398 PGBD4P3-201ENST00000440731 581 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.21□□□□□ -2.06
RORAP35398 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.21□□□□□ -2.06
RORAP35398 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RORAP35398 SNORA31.3-201ENST00000516029 96 ntBASIC2.21□□□□□ -2.06
RORAP35398 RNU6-415P-201ENST00000516252 97 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.21□□□□□ -2.06
RORAP35398 AC023050.2-201ENST00000544968 387 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.21□□□□□ -2.06
RORAP35398 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.21□□□□□ -2.06
RORAP35398 MIR1273D-201ENST00000577266 86 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.21□□□□□ -2.06
RORAP35398 AC068790.3-201ENST00000602988 553 ntBASIC2.21□□□□□ -2.06
RORAP35398 AL161798.1-201ENST00000604630 131 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
RORAP35398 AC108747.1-201ENST00000609508 535 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC103710.1-201ENST00000610003 901 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC013562.2-201ENST00000611632 603 ntBASIC2.21□□□□□ -2.06
RORAP35398 MTND5P6-201ENST00000422338 1798 ntBASIC2.21□□□□□ -2.06
RORAP35398 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
RORAP35398 RNU6-1167P-201ENST00000363227 94 ntBASIC2.2□□□□□ -2.06
RORAP35398 RNU5A-8P-201ENST00000364102 114 ntBASIC2.2□□□□□ -2.06
RORAP35398 U8.8-201ENST00000365399 135 ntBASIC2.2□□□□□ -2.06
RORAP35398 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RORAP35398 U3.37-201ENST00000408528 213 ntBASIC2.2□□□□□ -2.06
RORAP35398 RNU6-1328P-201ENST00000410938 106 ntBASIC2.2□□□□□ -2.06
RORAP35398 NDUFS5P4-201ENST00000412983 318 ntBASIC2.2□□□□□ -2.06
RORAP35398 AC107081.1-201ENST00000414975 361 ntBASIC2.2□□□□□ -2.06
RORAP35398 AC096649.2-201ENST00000416186 393 ntBASIC2.2□□□□□ -2.06
RORAP35398 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.2□□□□□ -2.06
RORAP35398 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.2□□□□□ -2.06
RORAP35398 AL031659.1-201ENST00000447075 539 ntBASIC2.2□□□□□ -2.06
RORAP35398 Z73417.1-201ENST00000447373 778 ntBASIC2.2□□□□□ -2.06
RORAP35398 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.2□□□□□ -2.06
RORAP35398 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.2□□□□□ -2.06
RORAP35398 MTATP6P7-201ENST00000453315 681 ntBASIC2.2□□□□□ -2.06
RORAP35398 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.2□□□□□ -2.06
RORAP35398 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.2□□□□□ -2.06
RORAP35398 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.2□□□□□ -2.06
RORAP35398 SNORD11.1-201ENST00000459482 85 ntBASIC2.2□□□□□ -2.06
RORAP35398 YWHAEP4-201ENST00000505390 198 ntBASIC2.2□□□□□ -2.06
RORAP35398 AP000907.2-201ENST00000530827 353 ntBASIC2.2□□□□□ -2.06
RORAP35398 AC105137.2-201ENST00000569073 466 ntBASIC2.2□□□□□ -2.06
RORAP35398 AL354943.1-201ENST00000572103 781 ntBASIC2.2□□□□□ -2.06
RORAP35398 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.2□□□□□ -2.06
RORAP35398 MIR3199-1-201ENST00000582434 88 ntBASIC2.2□□□□□ -2.06
RORAP35398 AC098826.3-201ENST00000603823 466 ntBASIC2.2□□□□□ -2.06
RORAP35398 AC091965.5-201ENST00000624785 342 ntBASIC2.2□□□□□ -2.06
RORAP35398 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.2□□□□□ -2.06
RORAP35398 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.2□□□□□ -2.06
RORAP35398 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
RORAP35398 AC110491.1-201ENST00000562191 2010 ntBASIC2.19□□□□□ -2.06
RORAP35398 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RORAP35398 Y_RNA.46-201ENST00000362695 102 ntBASIC2.19□□□□□ -2.06
RORAP35398 SNORA3A-201ENST00000364113 130 ntBASIC2.19□□□□□ -2.06
RORAP35398 RNU6-660P-201ENST00000364566 109 ntBASIC2.19□□□□□ -2.06
RORAP35398 RNU4-28P-201ENST00000364739 141 ntBASIC2.19□□□□□ -2.06
RORAP35398 RNU6-14P-201ENST00000384630 106 ntBASIC2.19□□□□□ -2.06
RORAP35398 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms