Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AP006587.4-201ENST00000526053 529 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.27□□□□□ -2.05
SHMT2P34897 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHMT2P34897 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHMT2P34897 GLYCAM1-201ENST00000546596 285 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.27□□□□□ -2.05
SHMT2P34897 MYL12BP1-201ENST00000569826 507 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 MIR5007-201ENST00000583098 95 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.27□□□□□ -2.05
SHMT2P34897 KC877982.1-201ENST00000602313 470 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AC034229.4-201ENST00000607861 441 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 AC008993.2-201ENST00000631744 806 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AC006927.3-201ENST00000638789 384 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
SHMT2P34897 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.26□□□□□ -2.05
SHMT2P34897 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHMT2P34897 RNU6-778P-201ENST00000363269 103 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AL513475.1-201ENST00000406602 315 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 RNU2-49P-201ENST00000410666 184 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 ELOCP17-201ENST00000414751 326 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AC107081.1-201ENST00000414975 361 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.26□□□□□ -2.05
SHMT2P34897 ISCA1P1-201ENST00000426679 387 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AL365184.2-201ENST00000431139 435 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.26□□□□□ -2.05
SHMT2P34897 RPS15AP5-201ENST00000436276 388 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 MTCYBP39-201ENST00000437562 491 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 RPS15AP27-201ENST00000449183 343 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.26□□□□□ -2.05
SHMT2P34897 AC113155.1-201ENST00000511141 769 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AC022616.6-201ENST00000520479 119 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AC107934.1-201ENST00000522215 217 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.26□□□□□ -2.05
SHMT2P34897 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.26□□□□□ -2.05
SHMT2P34897 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.26□□□□□ -2.05
SHMT2P34897 ZNF321P-202ENST00000550843 495 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 PCMTD1P2-201ENST00000565017 355 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AC103810.1-201ENST00000579873 453 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.26□□□□□ -2.05
SHMT2P34897 MIR7844-201ENST00000616161 122 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 AL590808.1-201ENST00000618696 141 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.26□□□□□ -2.05
SHMT2P34897 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SHMT2P34897 ELF2P3-201ENST00000445099 1506 ntBASIC2.26□□□□□ -2.05
SHMT2P34897 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHMT2P34897 AL445523.1-201ENST00000451184 1362 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SHMT2P34897 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHMT2P34897 UBE2L2-201ENST00000254302 429 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.25□□□□□ -2.05
SHMT2P34897 RNU6-511P-201ENST00000363496 107 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 RNY3P13-201ENST00000365542 102 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 RNU6-14P-201ENST00000384630 106 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 BPY2DP-201ENST00000422208 265 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 UBE2D3P1-201ENST00000436669 444 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.25□□□□□ -2.05
SHMT2P34897 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.25□□□□□ -2.05
SHMT2P34897 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.25□□□□□ -2.05
SHMT2P34897 MTCYBP35-201ENST00000503630 1137 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 RNA5SP165-201ENST00000517142 115 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.25□□□□□ -2.05
SHMT2P34897 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.25□□□□□ -2.05
SHMT2P34897 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.25□□□□□ -2.05
SHMT2P34897 ARL2BPP2-201ENST00000550907 489 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 RPS3AP4-201ENST00000555161 764 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.25□□□□□ -2.05
SHMT2P34897 MTCYBP22-201ENST00000603788 447 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 AL358072.1-201ENST00000604156 575 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 AP000860.1-201ENST00000605250 559 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 AC093591.3-201ENST00000634516 308 ntBASIC2.25□□□□□ -2.05
SHMT2P34897 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.24□□□□□ -2.05
SHMT2P34897 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHMT2P34897 RNY4P16-201ENST00000364768 94 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SHMT2P34897 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SHMT2P34897 RNU6-701P-201ENST00000384059 107 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 SNORD115.1-201ENST00000391109 76 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AL358075.3-201ENST00000426289 226 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC104651.1-201ENST00000427559 735 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHMT2P34897 WARS2P1-201ENST00000429678 537 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.24□□□□□ -2.05
SHMT2P34897 AL512286.1-201ENST00000439244 400 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.24□□□□□ -2.05
SHMT2P34897 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.24□□□□□ -2.05
SHMT2P34897 AC004263.1-201ENST00000479327 332 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC005178.1-201ENST00000508392 440 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.24□□□□□ -2.05
SHMT2P34897 RNA5SP281-201ENST00000516504 135 ntBASIC2.24□□□□□ -2.05
SHMT2P34897 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms