Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC003685.2-201ENST00000422795 395 ntBASIC1.95□□□□□ -2.1
USF1P22415 AC104651.1-201ENST00000427559 735 ntBASIC1.95□□□□□ -2.1
USF1P22415 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.95□□□□□ -2.1
USF1P22415 HMGB1P27-201ENST00000431429 603 ntBASIC1.95□□□□□ -2.1
USF1P22415 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.95□□□□□ -2.1
USF1P22415 ANKRD26P4-201ENST00000455755 950 ntBASIC1.95□□□□□ -2.1
USF1P22415 snoU13.23-201ENST00000458863 104 ntBASIC1.95□□□□□ -2.1
USF1P22415 AC080013.2-201ENST00000460866 323 ntBASIC1.95□□□□□ -2.1
USF1P22415 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.95□□□□□ -2.1
USF1P22415 AC107222.1-201ENST00000510899 637 ntBASIC1.95□□□□□ -2.1
USF1P22415 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.95□□□□□ -2.1
USF1P22415 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.95□□□□□ -2.1
USF1P22415 AP000907.2-201ENST00000530827 353 ntBASIC1.95□□□□□ -2.1
USF1P22415 AC006199.1-201ENST00000548728 219 ntBASIC1.95□□□□□ -2.1
USF1P22415 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
USF1P22415 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.95□□□□□ -2.1
USF1P22415 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.95□□□□□ -2.1
USF1P22415 DEFB122-202ENST00000569013 197 ntBASIC1.95□□□□□ -2.1
USF1P22415 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.95□□□□□ -2.1
USF1P22415 AC091057.3-201ENST00000602684 733 ntBASIC1.95□□□□□ -2.1
USF1P22415 BNIP3P10-201ENST00000605360 577 ntBASIC1.95□□□□□ -2.1
USF1P22415 uc_338.14-201ENST00000613162 166 ntBASIC1.95□□□□□ -2.1
USF1P22415 AC011939.3-201ENST00000613686 466 ntBASIC1.95□□□□□ -2.1
USF1P22415 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.95□□□□□ -2.1
USF1P22415 AL356596.1-201ENST00000624230 379 ntBASIC1.95□□□□□ -2.1
USF1P22415 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.95□□□□□ -2.1
USF1P22415 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.95□□□□□ -2.1
USF1P22415 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
USF1P22415 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.94□□□□□ -2.1
USF1P22415 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.94□□□□□ -2.1
USF1P22415 RNU6-658P-201ENST00000384606 106 ntBASIC1.94□□□□□ -2.1
USF1P22415 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
USF1P22415 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
USF1P22415 RNU6-1242P-201ENST00000391052 103 ntBASIC1.94□□□□□ -2.1
USF1P22415 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.94□□□□□ -2.1
USF1P22415 ELOCP9-201ENST00000418624 239 ntBASIC1.94□□□□□ -2.1
USF1P22415 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.94□□□□□ -2.1
USF1P22415 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USF1P22415 AC007560.1-201ENST00000426912 237 ntBASIC1.94□□□□□ -2.1
USF1P22415 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.94□□□□□ -2.1
USF1P22415 AL161651.1-201ENST00000440882 223 ntBASIC1.94□□□□□ -2.1
USF1P22415 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.94□□□□□ -2.1
USF1P22415 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.94□□□□□ -2.1
USF1P22415 RPL23AP35-201ENST00000451906 501 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.94□□□□□ -2.1
USF1P22415 AC108059.3-201ENST00000456388 214 ntBASIC1.94□□□□□ -2.1
USF1P22415 RPL23AP41-201ENST00000484754 458 ntBASIC1.94□□□□□ -2.1
USF1P22415 RPL9P6-201ENST00000492764 598 ntBASIC1.94□□□□□ -2.1
USF1P22415 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USF1P22415 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USF1P22415 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.94□□□□□ -2.1
USF1P22415 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.94□□□□□ -2.1
USF1P22415 AP003467.2-201ENST00000520175 319 ntBASIC1.94□□□□□ -2.1
USF1P22415 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USF1P22415 DEFB108A-201ENST00000530110 222 ntBASIC1.94□□□□□ -2.1
USF1P22415 AP000889.2-201ENST00000532684 490 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC087241.2-201ENST00000535801 324 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC105137.2-201ENST00000569073 466 ntBASIC1.94□□□□□ -2.1
USF1P22415 MIR3167-201ENST00000579623 85 ntBASIC1.94□□□□□ -2.1
USF1P22415 MIR544B-201ENST00000582372 78 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC091152.3-201ENST00000604227 325 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC067747.1-201ENST00000608026 250 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC069294.1-201ENST00000608397 350 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.94□□□□□ -2.1
USF1P22415 AP000484.1-201ENST00000620067 1252 ntBASIC1.94□□□□□ -2.1
USF1P22415 AL136313.1-201ENST00000624804 202 ntBASIC1.94□□□□□ -2.1
USF1P22415 AC110994.2-201ENST00000635481 492 ntBASIC1.94□□□□□ -2.1
USF1P22415 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USF1P22415 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
USF1P22415 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.94□□□□□ -2.1
USF1P22415 AC069528.2-201ENST00000624849 1991 ntBASIC1.94□□□□□ -2.1
USF1P22415 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
USF1P22415 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
USF1P22415 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USF1P22415 NACAP2-201ENST00000318548 624 ntBASIC1.93□□□□□ -2.1
USF1P22415 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
USF1P22415 RNU5A-8P-201ENST00000364102 114 ntBASIC1.93□□□□□ -2.1
USF1P22415 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
USF1P22415 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
USF1P22415 RNU6-769P-201ENST00000384407 104 ntBASIC1.93□□□□□ -2.1
USF1P22415 AC119751.3-201ENST00000399720 670 ntBASIC1.93□□□□□ -2.1
USF1P22415 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.93□□□□□ -2.1
USF1P22415 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.93□□□□□ -2.1
USF1P22415 AL109913.1-201ENST00000421173 514 ntBASIC1.93□□□□□ -2.1
USF1P22415 AC084290.1-201ENST00000434995 374 ntBASIC1.93□□□□□ -2.1
USF1P22415 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.93□□□□□ -2.1
USF1P22415 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.93□□□□□ -2.1
USF1P22415 AC112673.1-201ENST00000513168 575 ntBASIC1.93□□□□□ -2.1
USF1P22415 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.93□□□□□ -2.1
USF1P22415 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
USF1P22415 AP005902.1-201ENST00000521358 186 ntBASIC1.93□□□□□ -2.1
USF1P22415 MTCYBP20-201ENST00000524239 1129 ntBASIC1.93□□□□□ -2.1
USF1P22415 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.93□□□□□ -2.1
USF1P22415 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.93□□□□□ -2.1
USF1P22415 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
USF1P22415 MIR4765-201ENST00000585007 77 ntBASIC1.93□□□□□ -2.1
USF1P22415 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.93□□□□□ -2.1
USF1P22415 BNIP3P23-201ENST00000599655 511 ntBASIC1.93□□□□□ -2.1
USF1P22415 BCRP9-201ENST00000605312 388 ntBASIC1.93□□□□□ -2.1
USF1P22415 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms