Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3□□□□□ -1.93
MSH3P20585 FDX1P2-201ENST00000450769 375 ntBASIC3□□□□□ -1.93
MSH3P20585 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3□□□□□ -1.93
MSH3P20585 AL356010.1-201ENST00000456364 102 ntBASIC3□□□□□ -1.93
MSH3P20585 RPS20P20-201ENST00000460498 340 ntBASIC3□□□□□ -1.93
MSH3P20585 AC083798.1-201ENST00000472671 131 ntBASIC3□□□□□ -1.93
MSH3P20585 AC116562.3-201ENST00000506136 177 ntBASIC3□□□□□ -1.93
MSH3P20585 RNA5SP341-201ENST00000516261 117 ntBASIC3□□□□□ -1.93
MSH3P20585 SNORA70.16-201ENST00000516390 95 ntBASIC3□□□□□ -1.93
MSH3P20585 RN7SKP258-201ENST00000517151 304 ntBASIC3□□□□□ -1.93
MSH3P20585 AC009812.2-201ENST00000517657 457 ntBASIC3□□□□□ -1.93
MSH3P20585 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
MSH3P20585 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3□□□□□ -1.93
MSH3P20585 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3□□□□□ -1.93
MSH3P20585 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3□□□□□ -1.93
MSH3P20585 AC068587.5-201ENST00000528506 175 ntBASIC3□□□□□ -1.93
MSH3P20585 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3□□□□□ -1.93
MSH3P20585 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3□□□□□ -1.93
MSH3P20585 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3□□□□□ -1.93
MSH3P20585 AL355836.1-201ENST00000555951 870 ntBASIC3□□□□□ -1.93
MSH3P20585 AC007621.1-201ENST00000604544 437 ntBASIC3□□□□□ -1.93
MSH3P20585 AL161756.2-201ENST00000604597 246 ntBASIC3□□□□□ -1.93
MSH3P20585 AC008962.1-201ENST00000605729 304 ntBASIC3□□□□□ -1.93
MSH3P20585 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3□□□□□ -1.93
MSH3P20585 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
MSH3P20585 AC093648.1-201ENST00000623546 606 ntBASIC3□□□□□ -1.93
MSH3P20585 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3□□□□□ -1.93
MSH3P20585 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
MSH3P20585 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3□□□□□ -1.93
MSH3P20585 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
MSH3P20585 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
MSH3P20585 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
MSH3P20585 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
MSH3P20585 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3□□□□□ -1.93
MSH3P20585 AL137003.2-201ENST00000606924 2538 ntBASIC2.99□□□□□ -1.93
MSH3P20585 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MSH3P20585 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
MSH3P20585 RNU6-1090P-201ENST00000364065 94 ntBASIC2.99□□□□□ -1.93
MSH3P20585 Y_RNA.381-201ENST00000365666 102 ntBASIC2.99□□□□□ -1.93
MSH3P20585 SMIM11P1-201ENST00000369586 178 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MIR493-201ENST00000385254 89 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MIR454-201ENST00000390180 115 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AL031121.1-201ENST00000406553 254 ntBASIC2.99□□□□□ -1.93
MSH3P20585 OR51A5P-201ENST00000415429 942 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MRPL50P2-201ENST00000416821 482 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MTND1P23-201ENST00000416931 372 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AL451054.2-201ENST00000420896 202 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MRPS10P2-201ENST00000431226 381 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AL139415.2-201ENST00000431968 163 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AC000111.3-201ENST00000433478 193 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AL606489.2-201ENST00000433886 234 ntBASIC2.99□□□□□ -1.93
MSH3P20585 RPL7P54-201ENST00000438336 674 ntBASIC2.99□□□□□ -1.93
MSH3P20585 DDX3P2-201ENST00000446138 111 ntBASIC2.99□□□□□ -1.93
MSH3P20585 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MSH3P20585 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.99□□□□□ -1.93
MSH3P20585 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH3P20585 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH3P20585 RNU6-420P-201ENST00000458780 107 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MRPS17P3-201ENST00000465453 385 ntBASIC2.99□□□□□ -1.93
MSH3P20585 RPL27AP5-201ENST00000469428 449 ntBASIC2.99□□□□□ -1.93
MSH3P20585 RPL36AP51-201ENST00000487216 318 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AL049874.1-201ENST00000489560 388 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH3P20585 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MSH3P20585 AC109927.2-201ENST00000506416 303 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AL359273.1-201ENST00000510918 627 ntBASIC2.99□□□□□ -1.93
MSH3P20585 SNORD59.2-201ENST00000516873 68 ntBASIC2.99□□□□□ -1.93
MSH3P20585 SNORA31.26-201ENST00000517250 137 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AP001804.3-201ENST00000525146 880 ntBASIC2.99□□□□□ -1.93
MSH3P20585 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH3P20585 AC109635.3-201ENST00000529536 185 ntBASIC2.99□□□□□ -1.93
MSH3P20585 OR5BN1P-201ENST00000532955 829 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH3P20585 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH3P20585 H3F3AP1-201ENST00000559984 334 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AC092325.1-201ENST00000566449 554 ntBASIC2.99□□□□□ -1.93
MSH3P20585 RPL23AP84-201ENST00000571193 464 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MIR4775-201ENST00000581168 75 ntBASIC2.99□□□□□ -1.93
MSH3P20585 MIR4801-201ENST00000582704 82 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.99□□□□□ -1.93
MSH3P20585 AC008536.2-201ENST00000607284 349 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AP002826.1-201ENST00000608835 315 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AC009570.1-201ENST00000609599 745 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AL589994.2-201ENST00000621124 579 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AC007998.5-201ENST00000622938 237 ntBASIC2.99□□□□□ -1.93
MSH3P20585 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH3P20585 MTND5P17-201ENST00000418405 1603 ntBASIC2.99□□□□□ -1.93
MSH3P20585 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
MSH3P20585 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
MSH3P20585 RNU6-946P-201ENST00000383878 107 ntBASIC2.98□□□□□ -1.93
MSH3P20585 RNU6-14P-201ENST00000384630 106 ntBASIC2.98□□□□□ -1.93
MSH3P20585 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MSH3P20585 MIR1277-201ENST00000408536 78 ntBASIC2.98□□□□□ -1.93
MSH3P20585 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.98□□□□□ -1.93
MSH3P20585 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MSH3P20585 HSPE1P1-201ENST00000421494 318 ntBASIC2.98□□□□□ -1.93
MSH3P20585 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MSH3P20585 NDUFB4P7-201ENST00000423198 363 ntBASIC2.98□□□□□ -1.93
MSH3P20585 MTCO1P20-201ENST00000425366 358 ntBASIC2.98□□□□□ -1.93
MSH3P20585 RPL7L1P10-201ENST00000427790 463 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms