Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 snoU13.21-201ENST00000459368 105 ntBASIC0.59□□□□□ -2.31
COL6A3P12111 AC020699.1-201ENST00000505161 445 ntBASIC0.59□□□□□ -2.31
COL6A3P12111 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.59□□□□□ -2.31
COL6A3P12111 AC090142.3-201ENST00000519012 385 ntBASIC0.59□□□□□ -2.31
COL6A3P12111 AC087045.1-201ENST00000605856 382 ntBASIC0.59□□□□□ -2.31
COL6A3P12111 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
COL6A3P12111 AL591034.1-201ENST00000407447 340 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 AL591043.1-201ENST00000432461 424 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 RSL24D1P8-201ENST00000434442 492 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 HMGN2P9-201ENST00000476875 229 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 SNORD59.2-201ENST00000516873 68 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.59□□□□□ -2.32
COL6A3P12111 AC123786.2-201ENST00000603459 275 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 AL355297.3-201ENST00000604082 446 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 AC110792.3-201ENST00000595906 1614 ntBASIC0.59□□□□□ -2.32
COL6A3P12111 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
COL6A3P12111 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
COL6A3P12111 RPL7P31-201ENST00000450192 724 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 AC025857.1-201ENST00000525252 377 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 MIR4441-201ENST00000582623 100 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
COL6A3P12111 RPS6P14-201ENST00000425165 719 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.58□□□□□ -2.32
COL6A3P12111 RAB9AP5-201ENST00000437794 597 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 AP1S2P1-201ENST00000457344 379 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 PMCHL2-203ENST00000457791 237 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 KLF3P2-201ENST00000465138 268 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 OR5BM1P-201ENST00000512021 366 ntBASIC0.58□□□□□ -2.32
COL6A3P12111 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.58□□□□□ -2.32
COL6A3P12111 SNORD49B-201ENST00000365172 72 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 Y_RNA.421-201ENST00000384052 101 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 PRELID3BP11-201ENST00000414230 479 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 AL355297.2-201ENST00000604792 129 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.57□□□□□ -2.32
COL6A3P12111 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
COL6A3P12111 AL512604.1-201ENST00000404812 257 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 MTND5P14-201ENST00000441481 1267 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 CASP3P1-201ENST00000446037 609 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 AC103851.1-201ENST00000506833 274 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 MIR4458-201ENST00000578872 75 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 AC025449.1-201ENST00000603896 529 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 MIR938-201ENST00000401216 83 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 MIR1285-2-201ENST00000408311 88 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 RPS25P9-201ENST00000435591 252 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.57□□□□□ -2.32
COL6A3P12111 RN7SKP34-201ENST00000516142 244 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 AC004492.1-201ENST00000607036 742 ntBASIC0.57□□□□□ -2.32
COL6A3P12111 AC008555.8-201ENST00000623602 2168 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 AC022022.1-201ENST00000430304 178 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 AC092001.1-201ENST00000453012 261 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 RPL39P28-201ENST00000465655 155 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.56□□□□□ -2.32
COL6A3P12111 AC025465.4-201ENST00000513422 638 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.56□□□□□ -2.32
COL6A3P12111 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 AC009712.1-201ENST00000564938 316 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
COL6A3P12111 AC138627.2-201ENST00000624202 601 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.56□□□□□ -2.32
COL6A3P12111 AC010099.3-201ENST00000423896 409 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 MTND3P24-201ENST00000506306 329 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 SMARCE1P4-201ENST00000523647 241 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.56□□□□□ -2.32
COL6A3P12111 AC012676.2-201ENST00000619258 186 ntBASIC0.56□□□□□ -2.32
COL6A3P12111 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
COL6A3P12111 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.55□□□□□ -2.32
COL6A3P12111 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A3P12111 HMGN2P13-201ENST00000476476 274 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 RPL22P13-201ENST00000493291 347 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
COL6A3P12111 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A3P12111 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.55□□□□□ -2.32
COL6A3P12111 Z83818.1-201ENST00000603584 150 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 DUSP12P1-201ENST00000612874 516 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 AL662814.1-201ENST00000617364 121 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 RNU6-799P-201ENST00000363567 107 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 AC073464.3-201ENST00000422564 712 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.55□□□□□ -2.32
COL6A3P12111 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.55□□□□□ -2.32
COL6A3P12111 RNU6-158P-201ENST00000517104 100 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 MTCYBP23-201ENST00000558717 1102 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A3P12111 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.55□□□□□ -2.32
COL6A3P12111 AC073111.2-201ENST00000605657 1075 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 AC097372.5-201ENST00000623665 376 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 CFTRP2-201ENST00000634304 199 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 RNU6-335P-201ENST00000364563 113 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 RNA5SP189-201ENST00000364920 115 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.55□□□□□ -2.32
COL6A3P12111 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
COL6A3P12111 AL121578.1-201ENST00000428051 892 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 AL031183.1-201ENST00000457667 207 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 FAM206BP-201ENST00000510179 541 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 RNU6-1121P-201ENST00000516802 109 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.55□□□□□ -2.32
COL6A3P12111 AL592148.2-201ENST00000612210 372 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
COL6A3P12111 RNU6-160P-201ENST00000384591 107 ntBASIC0.54□□□□□ -2.32
COL6A3P12111 AC013268.2-201ENST00000420753 337 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms