Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCNAP12004 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
PCNAP12004 RNU6-914P-201ENST00000516749 109 ntBASIC3.22□□□□□ -1.89
PCNAP12004 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.22□□□□□ -1.89
PCNAP12004 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.22□□□□□ -1.89
PCNAP12004 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.22□□□□□ -1.89
PCNAP12004 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.22□□□□□ -1.89
PCNAP12004 RANP3-201ENST00000530970 276 ntBASIC3.22□□□□□ -1.89
PCNAP12004 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.22□□□□□ -1.89
PCNAP12004 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.22□□□□□ -1.89
PCNAP12004 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.22□□□□□ -1.89
PCNAP12004 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.22□□□□□ -1.89
PCNAP12004 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.22□□□□□ -1.89
PCNAP12004 AL162413.1-201ENST00000603198 110 ntBASIC3.22□□□□□ -1.89
PCNAP12004 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.22□□□□□ -1.89
PCNAP12004 AC008962.1-201ENST00000605729 304 ntBASIC3.22□□□□□ -1.89
PCNAP12004 AC008945.2-201ENST00000606056 604 ntBASIC3.22□□□□□ -1.89
PCNAP12004 AC002076.2-201ENST00000617362 122 ntBASIC3.22□□□□□ -1.89
PCNAP12004 AC034229.5-201ENST00000624258 185 ntBASIC3.22□□□□□ -1.89
PCNAP12004 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.22□□□□□ -1.89
PCNAP12004 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCNAP12004 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCNAP12004 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCNAP12004 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCNAP12004 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCNAP12004 HSPA8P4-201ENST00000511877 1920 ntBASIC3.21□□□□□ -1.9
PCNAP12004 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.9
PCNAP12004 SNORD56.3-201ENST00000363507 71 ntBASIC3.21□□□□□ -1.9
PCNAP12004 Y_RNA.245-201ENST00000364493 95 ntBASIC3.21□□□□□ -1.9
PCNAP12004 RNU6-534P-201ENST00000364877 106 ntBASIC3.21□□□□□ -1.9
PCNAP12004 SNORA4.3-201ENST00000365564 137 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AL031121.1-201ENST00000406553 254 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.21□□□□□ -1.9
PCNAP12004 TMEM167AP1-201ENST00000423409 219 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.21□□□□□ -1.9
PCNAP12004 Z82210.1-201ENST00000440037 231 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.21□□□□□ -1.9
PCNAP12004 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.21□□□□□ -1.9
PCNAP12004 RNU6-261P-201ENST00000459506 102 ntBASIC3.21□□□□□ -1.9
PCNAP12004 MTCO3P38-201ENST00000468910 766 ntBASIC3.21□□□□□ -1.9
PCNAP12004 RPL39P36-201ENST00000490784 156 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC093663.1-201ENST00000497190 394 ntBASIC3.21□□□□□ -1.9
PCNAP12004 MTCO3P9-201ENST00000506989 781 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.21□□□□□ -1.9
PCNAP12004 AC105417.1-201ENST00000514691 285 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.21□□□□□ -1.9
PCNAP12004 RNU6-685P-201ENST00000517088 95 ntBASIC3.21□□□□□ -1.9
PCNAP12004 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.21□□□□□ -1.9
PCNAP12004 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.21□□□□□ -1.9
PCNAP12004 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.21□□□□□ -1.9
PCNAP12004 AC006504.3-201ENST00000586818 523 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.21□□□□□ -1.9
PCNAP12004 AL356321.1-201ENST00000621360 228 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC024940.5-201ENST00000622889 474 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.21□□□□□ -1.9
PCNAP12004 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.21□□□□□ -1.9
PCNAP12004 AL512643.1-201ENST00000635735 524 ntBASIC3.21□□□□□ -1.9
PCNAP12004 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCNAP12004 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.21□□□□□ -1.9
PCNAP12004 AL049641.1-201ENST00000441055 1948 ntBASIC3.21□□□□□ -1.9
PCNAP12004 AC090740.1-201ENST00000623193 2262 ntBASIC3.21□□□□□ -1.9
PCNAP12004 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNAP12004 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCNAP12004 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCNAP12004 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PCNAP12004 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCNAP12004 SNORA14A-201ENST00000364773 135 ntBASIC3.2□□□□□ -1.9
PCNAP12004 Y_RNA.295-201ENST00000364918 102 ntBASIC3.2□□□□□ -1.9
PCNAP12004 Y_RNA.534-201ENST00000384599 112 ntBASIC3.2□□□□□ -1.9
PCNAP12004 MIR1277-201ENST00000408536 78 ntBASIC3.2□□□□□ -1.9
PCNAP12004 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 OR6C66P-201ENST00000414917 930 ntBASIC3.2□□□□□ -1.9
PCNAP12004 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
PCNAP12004 AC000111.3-201ENST00000433478 193 ntBASIC3.2□□□□□ -1.9
PCNAP12004 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 FGF7P6-202ENST00000451282 293 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.2□□□□□ -1.9
PCNAP12004 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.2□□□□□ -1.9
PCNAP12004 SNORA84-201ENST00000459229 133 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 RPL21P10-201ENST00000463521 490 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AC104472.2-201ENST00000469035 601 ntBASIC3.2□□□□□ -1.9
PCNAP12004 MTAPP1-201ENST00000489154 819 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.2□□□□□ -1.9
PCNAP12004 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.2□□□□□ -1.9
PCNAP12004 RNU6-928P-201ENST00000516876 104 ntBASIC3.2□□□□□ -1.9
PCNAP12004 SUB1P1-201ENST00000524415 382 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.2□□□□□ -1.9
PCNAP12004 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PCNAP12004 AC007458.1-201ENST00000542812 373 ntBASIC3.2□□□□□ -1.9
PCNAP12004 HIF1AP1-201ENST00000553642 175 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AC005476.1-201ENST00000554427 397 ntBASIC3.2□□□□□ -1.9
PCNAP12004 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
PCNAP12004 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.2□□□□□ -1.9
PCNAP12004 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
PCNAP12004 MTCO3P24-201ENST00000572729 782 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms