Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC002542.1-201ENST00000440683 193 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 VN1R10P-201ENST00000447106 875 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.17□□□□□ -2.22
FREM3P0C091 AP1S2P1-201ENST00000457344 379 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.17□□□□□ -2.22
FREM3P0C091 SMURF2P1-201ENST00000514992 481 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 AC103833.1-201ENST00000517442 172 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.17□□□□□ -2.22
FREM3P0C091 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.17□□□□□ -2.22
FREM3P0C091 HSPA8P13-201ENST00000523715 472 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.17□□□□□ -2.22
FREM3P0C091 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.17□□□□□ -2.22
FREM3P0C091 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 uc_338.14-201ENST00000613162 166 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 MIR4275-201ENST00000636486 87 ntBASIC1.17□□□□□ -2.22
FREM3P0C091 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
FREM3P0C091 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.17□□□□□ -2.22
FREM3P0C091 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
FREM3P0C091 MIR16-1-201ENST00000385271 89 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AP002784.2-201ENST00000397300 549 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AL356131.1-201ENST00000405826 414 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 TXNP7-201ENST00000406296 293 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 SNORD56-201ENST00000413522 71 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC246680.2-201ENST00000422106 389 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AL121601.2-201ENST00000438019 707 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC009238.1-201ENST00000442165 424 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC007000.2-201ENST00000442564 487 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC009237.6-201ENST00000446969 424 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.16□□□□□ -2.22
FREM3P0C091 RNU7-193P-201ENST00000516723 65 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 RNA5SP291-201ENST00000517222 105 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC125611.1-201ENST00000549563 229 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.16□□□□□ -2.22
FREM3P0C091 AC011939.3-201ENST00000613686 466 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AL445493.3-201ENST00000619568 477 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC106730.3-201ENST00000624568 641 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AP000648.3-201ENST00000623539 4507 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
FREM3P0C091 RNU6-582P-201ENST00000362989 107 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 RNU4-51P-201ENST00000364206 140 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 RNU6-115P-201ENST00000364310 107 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AL356421.1-201ENST00000403255 413 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 RNU2-63P-201ENST00000410792 194 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.16□□□□□ -2.22
FREM3P0C091 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.16□□□□□ -2.22
FREM3P0C091 RPS3AP44-201ENST00000425466 790 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.16□□□□□ -2.22
FREM3P0C091 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.16□□□□□ -2.22
FREM3P0C091 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.16□□□□□ -2.22
FREM3P0C091 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
FREM3P0C091 AC098591.2-201ENST00000510152 315 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.16□□□□□ -2.22
FREM3P0C091 AP005639.2-201ENST00000527592 928 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 OR5AL2P-201ENST00000532185 920 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.16□□□□□ -2.22
FREM3P0C091 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.16□□□□□ -2.22
FREM3P0C091 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.16□□□□□ -2.22
FREM3P0C091 AL450336.1-201ENST00000605180 586 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC007349.4-201ENST00000608114 532 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AC004009.2-201ENST00000623016 728 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AP002791.1-201ENST00000623291 381 ntBASIC1.16□□□□□ -2.22
FREM3P0C091 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.16□□□□□ -2.22
FREM3P0C091 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
FREM3P0C091 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
FREM3P0C091 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
FREM3P0C091 Y_RNA.36-201ENST00000362602 112 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
FREM3P0C091 MIR888-201ENST00000401186 77 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 RPS20P15-201ENST00000412792 311 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 AC244453.4-201ENST00000419150 388 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 BPY2DP-201ENST00000422208 265 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 FAM204CP-201ENST00000424489 642 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 AIMP1P2-201ENST00000425294 312 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.15□□□□□ -2.23
FREM3P0C091 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.15□□□□□ -2.23
FREM3P0C091 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.15□□□□□ -2.23
FREM3P0C091 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.15□□□□□ -2.23
FREM3P0C091 PSMA3P-201ENST00000555485 635 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.15□□□□□ -2.23
FREM3P0C091 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.15□□□□□ -2.23
FREM3P0C091 WISP1-OT1-201ENST00000602893 642 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.15□□□□□ -2.23
FREM3P0C091 AC106052.1-201ENST00000608029 497 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 MIR6734-201ENST00000621166 68 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 AC091932.3-201ENST00000624223 323 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
FREM3P0C091 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.15□□□□□ -2.23
FREM3P0C091 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
FREM3P0C091 AC083799.1-201ENST00000366451 910 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 RNU1-148P-201ENST00000384472 162 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 RPL7P27-201ENST00000403775 720 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 MTND5P8-201ENST00000449817 1083 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 OFD1P3Y-201ENST00000453312 783 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.15□□□□□ -2.23
FREM3P0C091 MTCYBP35-201ENST00000503630 1137 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 LTV1P1-201ENST00000510683 1237 ntBASIC1.15□□□□□ -2.23
FREM3P0C091 SNORA31.24-201ENST00000517232 57 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms