Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC6P09630 AC135721.1-201ENST00000497954 479 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 EIF4EP3-201ENST00000498782 656 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 MTND3P22-201ENST00000510932 243 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 CBX3P7-201ENST00000532876 502 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC6P09630 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC6P09630 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC6P09630 RPS3AP23-202ENST00000574601 686 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AC105224.1-201ENST00000587055 421 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AC018638.8-201ENST00000588755 281 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AC011712.1-201ENST00000588959 234 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC6P09630 U6.98-201ENST00000637157 84 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC6P09630 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 AF127577.6-201ENST00000623352 2191 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 AL136360.1-201ENST00000503377 1900 ntBASIC3.4□□□□□ -1.86
HOXC6P09630 AC233263.6-201ENST00000631132 1963 ntBASIC3.4□□□□□ -1.86
HOXC6P09630 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
HOXC6P09630 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXC6P09630 Y_RNA.11-201ENST00000362375 109 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 Y_RNA.142-201ENST00000363491 102 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 U3.11-201ENST00000364476 212 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 Y_RNA.255-201ENST00000364581 97 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 Y_RNA.263-201ENST00000364659 114 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXC6P09630 AC110754.1-201ENST00000399740 601 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 RNA5SP56-201ENST00000410277 118 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 RNU2-36P-201ENST00000410361 191 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 RNU2-62P-201ENST00000410868 191 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC6P09630 PDCL2P1-201ENST00000419302 352 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC6P09630 MTND1P14-201ENST00000427400 950 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC093106.2-201ENST00000428212 385 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC6P09630 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC6P09630 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC6P09630 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC6P09630 HMGN2P21-201ENST00000447764 270 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AL109933.2-201ENST00000452651 260 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC006539.3-201ENST00000454258 129 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC108059.3-201ENST00000456388 214 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC6P09630 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXC6P09630 AC004062.1-201ENST00000509926 645 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 RNU6-64P-201ENST00000517119 105 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC6P09630 AP004242.1-201ENST00000533701 349 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC023050.3-201ENST00000541142 333 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 CR383656.7-201ENST00000548164 174 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXC6P09630 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC6P09630 AC138761.3-201ENST00000579993 334 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXC6P09630 AL669831.4-202ENST00000590817 238 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC005261.5-201ENST00000596280 355 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC012669.1-201ENST00000603209 283 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC6P09630 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC6P09630 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXC6P09630 AC006026.1-201ENST00000444025 1803 ntBASIC3.4□□□□□ -1.87
HOXC6P09630 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC6P09630 GABPAP-201ENST00000419271 1356 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
HOXC6P09630 AL359693.1-201ENST00000614959 2407 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNU6-845P-201ENST00000362578 103 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNU4-73P-201ENST00000363164 141 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNU6-511P-201ENST00000363496 107 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNU6-188P-201ENST00000364207 107 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HOXC6P09630 RNU6-767P-201ENST00000384132 107 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 Y_RNA.509-201ENST00000384506 99 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HOXC6P09630 AL445529.1-201ENST00000398713 389 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNU6-1148P-201ENST00000410992 104 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNA5SP107-201ENST00000411358 122 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNU6-516P-201ENST00000411381 104 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 AC114491.1-201ENST00000416095 246 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC6P09630 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC6P09630 CBWD4P-201ENST00000445695 655 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC6P09630 RPS29P15-201ENST00000458329 171 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 RNU7-59P-201ENST00000459101 61 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC6P09630 AL163973.1-201ENST00000484753 577 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 AC078817.1-201ENST00000492623 435 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC6P09630 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC6P09630 FAM60DP-201ENST00000524174 632 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC6P09630 AC006270.2-201ENST00000578523 652 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms