Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC005771.1-201ENST00000585581 349 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC4P09017 AC104237.2-201ENST00000612456 443 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 AL589743.7-201ENST00000612637 233 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 AL596245.1-201ENST00000618994 362 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC4P09017 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC4P09017 AC008669.1-201ENST00000565823 2178 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 ZNF271P-202ENST00000465539 1970 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC4P09017 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC4P09017 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HOXC4P09017 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.02
HOXC4P09017 ZNF519P1-201ENST00000449011 1626 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC4P09017 AC027514.1-201ENST00000588561 1603 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 RNU6-198P-201ENST00000384258 104 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 Y_RNA.548-201ENST00000384656 105 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 RN7SKP266-201ENST00000410232 287 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 HMGN1P14-201ENST00000412459 517 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC4P09017 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC4P09017 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC4P09017 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC4P09017 RPL32P28-201ENST00000443577 397 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC4P09017 AP000542.1-201ENST00000448473 371 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 ARPC3P5-201ENST00000448802 534 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC4P09017 AC234775.1-201ENST00000454247 670 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 RNU6-420P-201ENST00000458780 107 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC4P09017 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC4P09017 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC4P09017 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC4P09017 CDC42P4-201ENST00000510507 563 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 TBCAP3-201ENST00000512475 312 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC4P09017 RNA5SP216-201ENST00000516111 123 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 RPPH1-2P-201ENST00000516688 293 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.4□□□□□ -2.03
HOXC4P09017 CKS1BP7-201ENST00000522230 235 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC022861.1-201ENST00000522981 663 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC4P09017 MTND4LP18-201ENST00000526864 291 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC016957.1-201ENST00000534895 309 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC4P09017 SNORD53-201ENST00000579969 78 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 MIR4298-201ENST00000584380 73 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC4P09017 AC010620.2-201ENST00000600135 313 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 NDUFA8P1-201ENST00000605525 367 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC4P09017 AL390208.1-201ENST00000605885 644 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC103810.6-201ENST00000606708 136 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC087241.4-201ENST00000612441 480 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AL161629.2-201ENST00000615347 275 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 MIR6130-201ENST00000619419 109 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AL445264.1-201ENST00000621719 171 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC068880.5-201ENST00000624331 290 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AL359740.1-201ENST00000624340 592 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AC110079.1-202ENST00000635213 138 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC4P09017 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC4P09017 AC005832.2-201ENST00000538921 1430 ntBASIC2.4□□□□□ -2.03
HOXC4P09017 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC4P09017 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HOXC4P09017 RNU5A-1-201ENST00000362698 116 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC4P09017 RNU6-533P-201ENST00000384144 107 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 ELOCP17-201ENST00000414751 326 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC4P09017 NDUFB4P7-201ENST00000423198 363 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 SNRPEP7-201ENST00000438350 220 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC244505.5-201ENST00000443639 207 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC009237.8-201ENST00000445492 379 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 USP9YP12-201ENST00000450481 570 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AL590365.1-201ENST00000450788 243 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 SNORD42A-201ENST00000459584 64 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC4P09017 AC106872.3-201ENST00000495104 446 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 AC107401.1-201ENST00000503426 685 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXC4P09017 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC4P09017 AC093677.1-201ENST00000514414 678 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.39□□□□□ -2.03
HOXC4P09017 AP002453.2-201ENST00000533503 320 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 AC091544.4-201ENST00000555268 342 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AMZ2P1-203ENST00000565833 850 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms