Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC105252.1-201ENST00000503089 286 ntBASIC3.16□□□□□ -1.9
RB1P06400 AC117522.1-201ENST00000509821 380 ntBASIC3.16□□□□□ -1.9
RB1P06400 AC114781.4-201ENST00000513707 639 ntBASIC3.16□□□□□ -1.9
RB1P06400 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.16□□□□□ -1.9
RB1P06400 RNU6-410P-201ENST00000517006 107 ntBASIC3.16□□□□□ -1.9
RB1P06400 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RB1P06400 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.16□□□□□ -1.9
RB1P06400 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.16□□□□□ -1.9
RB1P06400 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.16□□□□□ -1.9
RB1P06400 AL391261.3-201ENST00000557194 520 ntBASIC3.16□□□□□ -1.9
RB1P06400 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.16□□□□□ -1.9
RB1P06400 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.16□□□□□ -1.9
RB1P06400 AL591516.1-201ENST00000611326 274 ntBASIC3.16□□□□□ -1.9
RB1P06400 AC091834.1-201ENST00000614543 472 ntBASIC3.16□□□□□ -1.9
RB1P06400 AC090617.7-201ENST00000623952 126 ntBASIC3.16□□□□□ -1.9
RB1P06400 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RB1P06400 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.16□□□□□ -1.9
RB1P06400 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RB1P06400 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RB1P06400 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RB1P06400 AC073325.2-201ENST00000339545 159 ntBASIC3.15□□□□□ -1.91
RB1P06400 RNA5SP139-201ENST00000364340 117 ntBASIC3.15□□□□□ -1.91
RB1P06400 SNORA18.3-201ENST00000384122 132 ntBASIC3.15□□□□□ -1.91
RB1P06400 MIR888-201ENST00000401186 77 ntBASIC3.15□□□□□ -1.91
RB1P06400 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC016907.1-201ENST00000419483 435 ntBASIC3.15□□□□□ -1.91
RB1P06400 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.15□□□□□ -1.91
RB1P06400 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.15□□□□□ -1.91
RB1P06400 AL592045.1-201ENST00000429867 352 ntBASIC3.15□□□□□ -1.91
RB1P06400 GPR143P-201ENST00000434155 205 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.15□□□□□ -1.91
RB1P06400 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
RB1P06400 MTCYBP1-201ENST00000454315 1119 ntBASIC3.15□□□□□ -1.91
RB1P06400 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.15□□□□□ -1.91
RB1P06400 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC233702.1-201ENST00000482905 502 ntBASIC3.15□□□□□ -1.91
RB1P06400 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.15□□□□□ -1.91
RB1P06400 RNA5SP165-201ENST00000517142 115 ntBASIC3.15□□□□□ -1.91
RB1P06400 SNORA31.21-201ENST00000517180 77 ntBASIC3.15□□□□□ -1.91
RB1P06400 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.15□□□□□ -1.91
RB1P06400 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.15□□□□□ -1.91
RB1P06400 OR5B19P-201ENST00000531766 928 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.15□□□□□ -1.91
RB1P06400 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.15□□□□□ -1.91
RB1P06400 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.15□□□□□ -1.91
RB1P06400 AL391840.1-201ENST00000571144 367 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC024153.1-201ENST00000603103 365 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC073648.5-201ENST00000603502 305 ntBASIC3.15□□□□□ -1.91
RB1P06400 NUTF2P8-201ENST00000604593 363 ntBASIC3.15□□□□□ -1.91
RB1P06400 AC022893.3-201ENST00000607665 437 ntBASIC3.15□□□□□ -1.91
RB1P06400 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
RB1P06400 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.91
RB1P06400 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RB1P06400 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.14□□□□□ -1.91
RB1P06400 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RB1P06400 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.14□□□□□ -1.91
RB1P06400 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
RB1P06400 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
RB1P06400 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RB1P06400 RNU6-108P-201ENST00000365558 107 ntBASIC3.14□□□□□ -1.91
RB1P06400 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RB1P06400 RNU2-68P-201ENST00000410878 191 ntBASIC3.14□□□□□ -1.91
RB1P06400 AL663109.1-201ENST00000411498 844 ntBASIC3.14□□□□□ -1.91
RB1P06400 AC092809.3-201ENST00000415453 231 ntBASIC3.14□□□□□ -1.91
RB1P06400 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.14□□□□□ -1.91
RB1P06400 RPL36AP53-201ENST00000432891 316 ntBASIC3.14□□□□□ -1.91
RB1P06400 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RB1P06400 AC079781.2-201ENST00000446424 169 ntBASIC3.14□□□□□ -1.91
RB1P06400 EEF1B2P7-201ENST00000451177 676 ntBASIC3.14□□□□□ -1.91
RB1P06400 AC093899.1-201ENST00000457984 376 ntBASIC3.14□□□□□ -1.91
RB1P06400 AC092798.1-201ENST00000458542 409 ntBASIC3.14□□□□□ -1.91
RB1P06400 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
RB1P06400 MTND3P5-201ENST00000512798 333 ntBASIC3.14□□□□□ -1.91
RB1P06400 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.14□□□□□ -1.91
RB1P06400 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.14□□□□□ -1.91
RB1P06400 CYCSP39-201ENST00000565821 309 ntBASIC3.14□□□□□ -1.91
RB1P06400 AC098848.2-201ENST00000588023 330 ntBASIC3.14□□□□□ -1.91
RB1P06400 AC087683.1-201ENST00000591187 441 ntBASIC3.14□□□□□ -1.91
RB1P06400 BNIP3P9-201ENST00000603714 553 ntBASIC3.14□□□□□ -1.91
RB1P06400 AL121992.2-201ENST00000606262 256 ntBASIC3.14□□□□□ -1.91
RB1P06400 AC130324.3-201ENST00000614165 542 ntBASIC3.14□□□□□ -1.91
RB1P06400 AL161629.2-201ENST00000615347 275 ntBASIC3.14□□□□□ -1.91
RB1P06400 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
RB1P06400 AL359757.2-201ENST00000624309 274 ntBASIC3.14□□□□□ -1.91
RB1P06400 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
RB1P06400 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RB1P06400 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.14□□□□□ -1.91
RB1P06400 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RB1P06400 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.14□□□□□ -1.91
RB1P06400 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
RB1P06400 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RB1P06400 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.13□□□□□ -1.91
RB1P06400 RNU6-884P-201ENST00000363889 107 ntBASIC3.13□□□□□ -1.91
RB1P06400 RNU6-282P-201ENST00000365357 103 ntBASIC3.13□□□□□ -1.91
RB1P06400 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
RB1P06400 RNA5SP508-201ENST00000411327 119 ntBASIC3.13□□□□□ -1.91
RB1P06400 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.13□□□□□ -1.91
RB1P06400 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.13□□□□□ -1.91
RB1P06400 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms