Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SFR1P1-201ENST00000403720 688 ntBASIC0.29□□□□□ -2.36
APOBP04114 RN7SKP158-201ENST00000410453 326 ntBASIC0.29□□□□□ -2.36
APOBP04114 TMEM167AP1-201ENST00000423409 219 ntBASIC0.29□□□□□ -2.36
APOBP04114 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.29□□□□□ -2.36
APOBP04114 RPS27P22-201ENST00000478056 241 ntBASIC0.29□□□□□ -2.36
APOBP04114 AC004817.2-201ENST00000561794 651 ntBASIC0.29□□□□□ -2.36
APOBP04114 AC074051.3-201ENST00000570238 358 ntBASIC0.29□□□□□ -2.36
APOBP04114 AC136932.1-201ENST00000574771 208 ntBASIC0.29□□□□□ -2.36
APOBP04114 AL355816.1-201ENST00000607951 118 ntBASIC0.29□□□□□ -2.36
APOBP04114 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.29□□□□□ -2.36
APOBP04114 SNORA16B-201ENST00000364674 135 ntBASIC0.29□□□□□ -2.36
APOBP04114 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.29□□□□□ -2.36
APOBP04114 AL513475.1-201ENST00000406602 315 ntBASIC0.29□□□□□ -2.36
APOBP04114 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
APOBP04114 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
APOBP04114 RPS24P6-201ENST00000452670 400 ntBASIC0.29□□□□□ -2.36
APOBP04114 AC010627.1-201ENST00000503819 1294 ntBASIC0.29□□□□□ -2.36
APOBP04114 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.29□□□□□ -2.36
APOBP04114 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.29□□□□□ -2.36
APOBP04114 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.29□□□□□ -2.36
APOBP04114 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.29□□□□□ -2.36
APOBP04114 AC008945.2-201ENST00000606056 604 ntBASIC0.29□□□□□ -2.36
APOBP04114 AC068880.5-201ENST00000624331 290 ntBASIC0.29□□□□□ -2.36
APOBP04114 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.29□□□□□ -2.36
APOBP04114 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
APOBP04114 AC097463.2-201ENST00000421074 142 ntBASIC0.28□□□□□ -2.36
APOBP04114 AGGF1P5-201ENST00000567900 919 ntBASIC0.28□□□□□ -2.36
APOBP04114 AC091925.2-201ENST00000625059 256 ntBASIC0.28□□□□□ -2.36
APOBP04114 MIR5087-201ENST00000635826 76 ntBASIC0.28□□□□□ -2.36
APOBP04114 Y_RNA.170-201ENST00000363746 110 ntBASIC0.28□□□□□ -2.36
APOBP04114 MTCYBP24-201ENST00000420387 1106 ntBASIC0.28□□□□□ -2.36
APOBP04114 AL353689.1-201ENST00000438895 199 ntBASIC0.28□□□□□ -2.36
APOBP04114 RABEPKP1-201ENST00000440529 1026 ntBASIC0.28□□□□□ -2.36
APOBP04114 snoU109.1-201ENST00000459339 135 ntBASIC0.28□□□□□ -2.36
APOBP04114 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.28□□□□□ -2.36
APOBP04114 AL139344.1-201ENST00000605228 195 ntBASIC0.28□□□□□ -2.36
APOBP04114 PRR13P7-201ENST00000605538 430 ntBASIC0.28□□□□□ -2.36
APOBP04114 AC025594.3-201ENST00000613068 790 ntBASIC0.28□□□□□ -2.36
APOBP04114 SNORA25.8-201ENST00000364831 128 ntBASIC0.28□□□□□ -2.36
APOBP04114 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.28□□□□□ -2.36
APOBP04114 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.28□□□□□ -2.36
APOBP04114 MTRNR2L2-201ENST00000604882 87 ntBASIC0.28□□□□□ -2.36
APOBP04114 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
APOBP04114 Y_RNA.457-201ENST00000384237 111 ntBASIC0.28□□□□□ -2.37
APOBP04114 MIR146A-201ENST00000385201 99 ntBASIC0.28□□□□□ -2.37
APOBP04114 RPL30P13-201ENST00000418873 348 ntBASIC0.28□□□□□ -2.37
APOBP04114 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.28□□□□□ -2.37
APOBP04114 RPL31P20-201ENST00000449593 360 ntBASIC0.28□□□□□ -2.37
APOBP04114 AC090616.3-201ENST00000582184 217 ntBASIC0.28□□□□□ -2.37
APOBP04114 AP001485.1-201ENST00000604799 199 ntBASIC0.28□□□□□ -2.37
APOBP04114 ZNF702P-202ENST00000434269 1966 ntBASIC0.27□□□□□ -2.37
APOBP04114 RNU6-600P-201ENST00000362524 99 ntBASIC0.27□□□□□ -2.37
APOBP04114 AC241584.1-201ENST00000438469 1241 ntBASIC0.27□□□□□ -2.37
APOBP04114 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.27□□□□□ -2.37
APOBP04114 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.27□□□□□ -2.37
APOBP04114 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.27□□□□□ -2.37
APOBP04114 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.27□□□□□ -2.37
APOBP04114 AC006213.5-201ENST00000619673 288 ntBASIC0.27□□□□□ -2.37
APOBP04114 RPS4XP3-201ENST00000398541 413 ntBASIC0.27□□□□□ -2.37
APOBP04114 MIR1265-201ENST00000408444 86 ntBASIC0.27□□□□□ -2.37
APOBP04114 AL158823.1-201ENST00000418441 478 ntBASIC0.27□□□□□ -2.37
APOBP04114 MTATP6P7-201ENST00000453315 681 ntBASIC0.27□□□□□ -2.37
APOBP04114 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.27□□□□□ -2.37
APOBP04114 RNU1-23P-201ENST00000363361 144 ntBASIC0.27□□□□□ -2.37
APOBP04114 MIR30A-201ENST00000385092 71 ntBASIC0.27□□□□□ -2.37
APOBP04114 MIR607-201ENST00000385241 96 ntBASIC0.27□□□□□ -2.37
APOBP04114 MIR92A2-201ENST00000385299 75 ntBASIC0.27□□□□□ -2.37
APOBP04114 UBE2FP1-201ENST00000416536 447 ntBASIC0.27□□□□□ -2.37
APOBP04114 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.27□□□□□ -2.37
APOBP04114 AL031183.1-201ENST00000457667 207 ntBASIC0.27□□□□□ -2.37
APOBP04114 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.27□□□□□ -2.37
APOBP04114 AC087272.1-201ENST00000523624 533 ntBASIC0.27□□□□□ -2.37
APOBP04114 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.27□□□□□ -2.37
APOBP04114 COX6CP3-201ENST00000580869 223 ntBASIC0.27□□□□□ -2.37
APOBP04114 AL450336.1-201ENST00000605180 586 ntBASIC0.27□□□□□ -2.37
APOBP04114 RNU6-1222P-201ENST00000384615 107 ntBASIC0.26□□□□□ -2.37
APOBP04114 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
APOBP04114 SNORA63.3-201ENST00000362682 132 ntBASIC0.26□□□□□ -2.37
APOBP04114 MRPL35P1-201ENST00000404272 572 ntBASIC0.26□□□□□ -2.37
APOBP04114 RPL21P66-201ENST00000426566 466 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC244023.1-201ENST00000426884 112 ntBASIC0.26□□□□□ -2.37
APOBP04114 RSL24D1P8-201ENST00000434442 492 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.26□□□□□ -2.37
APOBP04114 EIF4EP3-201ENST00000498782 656 ntBASIC0.26□□□□□ -2.37
APOBP04114 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
APOBP04114 AC109635.4-202ENST00000531666 412 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.26□□□□□ -2.37
APOBP04114 AC242498.1-201ENST00000604134 111 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC073111.2-201ENST00000605657 1075 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC009974.1-201ENST00000608881 455 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC004852.3-201ENST00000614131 326 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC243994.1-201ENST00000618627 109 ntBASIC0.26□□□□□ -2.37
APOBP04114 CR848007.1-201ENST00000442354 1699 ntBASIC0.26□□□□□ -2.37
APOBP04114 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.26□□□□□ -2.37
APOBP04114 CYCTP-201ENST00000504253 315 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.26□□□□□ -2.37
APOBP04114 MTND4LP24-201ENST00000572277 291 ntBASIC0.26□□□□□ -2.37
APOBP04114 AC008751.2-201ENST00000597885 980 ntBASIC0.26□□□□□ -2.37
APOBP04114 FRG1HP-204ENST00000617940 757 ntBASIC0.26□□□□□ -2.37
APOBP04114 RNA5SP25-201ENST00000410815 110 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms