Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC093534.1-201ENST00000504977 132 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 SNORA31.18-201ENST00000517043 134 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 RNU6-64P-201ENST00000517119 105 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC007536.1-201ENST00000533382 349 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC007115.1-201ENST00000546853 234 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFBP01127 NACAP3-201ENST00000552100 481 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AL359212.1-201ENST00000556608 614 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFBP01127 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.74□□□□□ -1.97
PDGFBP01127 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFBP01127 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDGFBP01127 AC119751.7-201ENST00000600494 245 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AP000860.1-201ENST00000605250 559 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC068276.1-201ENST00000605793 379 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 AC245517.5-201ENST00000611529 162 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PDGFBP01127 AC110994.2-201ENST00000635481 492 ntBASIC2.74□□□□□ -1.97
PDGFBP01127 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFBP01127 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFBP01127 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PDGFBP01127 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
PDGFBP01127 AC008264.2-201ENST00000610193 3731 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 Y_RNA.164-201ENST00000363709 102 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RNU6-884P-201ENST00000363889 107 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RNY4P34-201ENST00000364779 95 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 U8.9-201ENST00000365667 134 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RPS3AP36-201ENST00000398190 775 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RNU4-26P-201ENST00000410270 107 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RNA5SP274-201ENST00000410484 108 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RN7SKP142-201ENST00000411236 328 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RNU6-195P-201ENST00000411352 109 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.73□□□□□ -1.97
PDGFBP01127 AC007283.2-201ENST00000424739 197 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.73□□□□□ -1.97
PDGFBP01127 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.73□□□□□ -1.97
PDGFBP01127 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.73□□□□□ -1.97
PDGFBP01127 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFBP01127 TIMM9P1-201ENST00000436122 256 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RPS15AP7-201ENST00000439294 405 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.73□□□□□ -1.97
PDGFBP01127 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.73□□□□□ -1.97
PDGFBP01127 MTATP6P30-201ENST00000443540 664 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 MTATP6P26-201ENST00000445926 662 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RPS27AP9-201ENST00000477681 438 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RPL23AP70-201ENST00000483361 460 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFBP01127 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RNU6-1003P-201ENST00000517099 105 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC107934.1-201ENST00000522215 217 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 COX6CP5-201ENST00000527162 228 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC137800.2-201ENST00000574375 120 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 MIR3146-201ENST00000580367 79 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC112191.3-201ENST00000604371 277 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC007621.1-201ENST00000604544 437 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 RPL23AP88-201ENST00000605759 454 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFBP01127 AC034102.8-201ENST00000615146 484 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC091953.2-201ENST00000623979 160 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC073476.4-201ENST00000628409 72 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC108206.1-201ENST00000570186 4159 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 MTND4P4-201ENST00000439033 1366 ntBASIC2.73□□□□□ -1.97
PDGFBP01127 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PDGFBP01127 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PDGFBP01127 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFBP01127 SET-203ENST00000372688 801 ntTSL 2 BASIC2.72□□□□□ -1.97
PDGFBP01127 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFBP01127 MRPL42P2-201ENST00000403169 426 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 ELOCP17-201ENST00000414751 326 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC006020.1-201ENST00000420179 1854 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.72□□□□□ -1.97
PDGFBP01127 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFBP01127 AC093151.1-201ENST00000427711 313 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC093106.2-201ENST00000428212 385 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 RPL21P2-201ENST00000440049 481 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 USP9YP15-201ENST00000442391 422 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AL353705.4-201ENST00000449661 238 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC108059.3-201ENST00000456388 214 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFBP01127 AC090525.1-201ENST00000479116 478 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 RPS15AP34-201ENST00000487776 387 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 SRIP1-201ENST00000489235 288 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC026801.1-201ENST00000497178 464 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 NDUFB4P2-201ENST00000509515 391 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFBP01127 RNA5SP217-201ENST00000515959 91 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 Y_RNA.695-201ENST00000516715 107 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 RN7SKP258-201ENST00000517151 304 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 SCARNA11.3-201ENST00000517276 130 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.72□□□□□ -1.97
PDGFBP01127 DEFB108A-201ENST00000530110 222 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFBP01127 MIR3118-1-201ENST00000581787 76 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFBP01127 OR1M4P-201ENST00000589199 287 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 HMGN1P30-201ENST00000589286 268 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 BNIP3P8-201ENST00000597863 560 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC135507.1-201ENST00000607214 561 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms