Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.91□□□□□ -1.94
CLPTM1O96005 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 NFU1P2-201ENST00000448700 469 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC009901.1-201ENST00000506703 541 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.91□□□□□ -1.94
CLPTM1O96005 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.91□□□□□ -1.94
CLPTM1O96005 FCF1P8-201ENST00000510322 597 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC074250.1-201ENST00000511117 192 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 RNU6-1281P-201ENST00000516223 105 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC109635.3-201ENST00000529536 185 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC005476.1-201ENST00000554427 397 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AL157687.1-201ENST00000554853 619 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 HMGB1P6-201ENST00000569046 646 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 MIR3944-201ENST00000581277 108 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC006504.3-201ENST00000586818 523 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC008752.3-201ENST00000588113 712 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.91□□□□□ -1.94
CLPTM1O96005 SRGNP1-201ENST00000603392 451 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC019159.1-201ENST00000605094 187 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 RPL23AP88-201ENST00000605759 454 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 AC009570.1-201ENST00000609599 745 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLPTM1O96005 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.91□□□□□ -1.94
CLPTM1O96005 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CLPTM1O96005 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC090740.1-201ENST00000623193 2262 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLPTM1O96005 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLPTM1O96005 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLPTM1O96005 AC138915.1-201ENST00000565427 1685 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 CUL1P1-201ENST00000509510 2425 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 ASNSP3-201ENST00000451989 1306 ntBASIC2.91□□□□□ -1.94
CLPTM1O96005 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.9□□□□□ -1.94
CLPTM1O96005 MIR208A-201ENST00000362287 71 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 Y_RNA.38-201ENST00000362617 102 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RNU1-33P-201ENST00000364249 162 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RNU6-1322P-201ENST00000364309 107 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RNA5SP139-201ENST00000364340 117 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 SNORA24.1-201ENST00000384401 135 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.9□□□□□ -1.95
CLPTM1O96005 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 RPL7L1P10-201ENST00000427790 463 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC000111.3-201ENST00000433478 193 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 HMGB3P12-201ENST00000438745 556 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 CACYBPP2-201ENST00000453625 678 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 RNU7-63P-201ENST00000459054 62 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RNA5SP310-201ENST00000459084 116 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RPL21P41-201ENST00000459863 264 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 MRPS17P3-201ENST00000465453 385 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC126389.1-201ENST00000477436 290 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RN7SL432P-201ENST00000484057 298 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC069439.1-201ENST00000494739 167 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC116562.3-201ENST00000506136 177 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 MTND1P35-201ENST00000526739 508 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC068587.5-201ENST00000528506 175 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 OR5AL2P-201ENST00000532185 920 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AL512310.1-201ENST00000548639 172 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 RPS3AP4-201ENST00000555161 764 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AL355836.1-201ENST00000555951 870 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC068135.2-201ENST00000569293 1028 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC024619.4-201ENST00000580924 316 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.9□□□□□ -1.95
CLPTM1O96005 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AL162713.1-201ENST00000604480 262 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC104458.1-201ENST00000608243 463 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC002064.3-201ENST00000623448 346 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.9□□□□□ -1.95
CLPTM1O96005 MIR4275-201ENST00000636486 87 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 MIR1321-201ENST00000637766 79 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 FAM35BP-202ENST00000497389 3337 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AC099654.7-201ENST00000635788 2127 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CLPTM1O96005 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
CLPTM1O96005 AL049781.1-201ENST00000623195 3585 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms