Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF4O95639 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4O95639 AL358075.3-201ENST00000426289 226 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4O95639 AC010153.1-201ENST00000432862 727 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 MTND1P32-201ENST00000433043 938 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4O95639 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.65□□□□□ -2.15
CPSF4O95639 AC020550.1-201ENST00000447385 163 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF4O95639 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4O95639 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF4O95639 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4O95639 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF4O95639 AC072039.1-201ENST00000477611 581 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 TRBV12-1-201ENST00000479785 344 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AL160314.1-201ENST00000490836 438 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC022493.1-201ENST00000492984 337 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC118465.1-201ENST00000513820 1271 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC110760.3-202ENST00000515177 371 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 SCARNA1-201ENST00000517138 166 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC105185.1-201ENST00000518705 535 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CPSF4O95639 MIR544B-201ENST00000582372 78 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF4O95639 BNIP3P23-201ENST00000599655 511 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AL355877.2-201ENST00000603670 358 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 DPPA3P3-201ENST00000603842 430 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 BCRP9-201ENST00000605312 388 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC007038.2-201ENST00000608095 740 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC004908.2-201ENST00000609090 574 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC008498.1-201ENST00000613012 531 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC016597.2-201ENST00000613256 341 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC079395.3-201ENST00000615161 484 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC097655.1-201ENST00000635075 318 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC006927.4-201ENST00000639187 543 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.65□□□□□ -2.15
CPSF4O95639 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CPSF4O95639 ZNF876P-202ENST00000398732 1485 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 FAM133CP-201ENST00000332869 704 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 RNU6-769P-201ENST00000384407 104 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 MIR524-201ENST00000385242 87 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 MIR888-201ENST00000401186 77 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 MIR1294-201ENST00000408503 142 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 RNU2-40P-201ENST00000410833 196 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 MTCO2P21-201ENST00000419780 677 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 USP12PX-201ENST00000432383 1057 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.64□□□□□ -2.15
CPSF4O95639 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 CR769776.1-201ENST00000441254 787 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4O95639 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 ELOCP30-201ENST00000447108 299 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4O95639 AC055855.1-201ENST00000489563 579 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AC104685.1-201ENST00000502445 371 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 HSPE1P23-201ENST00000509838 286 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 MTND5P13-201ENST00000513046 1079 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 RNU6-927P-201ENST00000516199 100 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 RNA5SP290-201ENST00000517133 127 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 AC022634.1-201ENST00000520765 532 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AC013828.2-201ENST00000532487 235 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4O95639 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4O95639 AC005498.1-201ENST00000592125 465 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AC245884.10-201ENST00000597355 337 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AL450336.1-201ENST00000605180 586 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AC239868.4-201ENST00000608318 671 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 OR10AB1P-201ENST00000609613 938 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4O95639 AC103706.2-201ENST00000638080 240 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 CCT4P2-201ENST00000233836 1548 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CPSF4O95639 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CPSF4O95639 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4O95639 AL137003.2-201ENST00000606924 2538 ntBASIC1.64□□□□□ -2.15
CPSF4O95639 RNU6-931P-201ENST00000363850 107 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 SNORA68.1-201ENST00000364537 132 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF4O95639 RNU1-52P-201ENST00000384190 164 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 AL139397.2-201ENST00000404529 772 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 U3.40-201ENST00000408706 208 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 RNU6-584P-201ENST00000410350 95 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 RNU2-49P-201ENST00000410666 184 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 USP9YP13-201ENST00000417797 480 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF4O95639 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.63□□□□□ -2.15
CPSF4O95639 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.63□□□□□ -2.15
CPSF4O95639 AC098614.2-201ENST00000426040 255 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 AC244035.1-201ENST00000430042 390 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF4O95639 RPS15AP5-201ENST00000436276 388 ntBASIC1.63□□□□□ -2.15
CPSF4O95639 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.63□□□□□ -2.15
CPSF4O95639 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms