Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CNOT4O95628 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
CNOT4O95628 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 AC138393.1-203ENST00000327086 343 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RNU6-874P-201ENST00000362390 105 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RNU6-14P-201ENST00000384630 106 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 MIR23B-201ENST00000384832 97 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 MIR517A-201ENST00000385001 87 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RNU6-817P-201ENST00000391083 104 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 MTHFD2P2-201ENST00000407725 247 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RNU2-3P-201ENST00000410144 191 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 AL356968.1-201ENST00000416622 474 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 Z74021.1-201ENST00000423610 407 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RPL23AP25-201ENST00000430973 463 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 SETP5-201ENST00000437270 562 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RPL23AP93-201ENST00000440847 484 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.98□□□□□ -1.77
CNOT4O95628 RPL23AP24-201ENST00000458203 385 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 U3.44-201ENST00000458938 192 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RPL31P60-201ENST00000478450 367 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 RN7SL810P-201ENST00000493031 276 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.98□□□□□ -1.77
CNOT4O95628 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.98□□□□□ -1.77
CNOT4O95628 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CNOT4O95628 RPL21P7-201ENST00000557463 483 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 MIR3921-201ENST00000577308 85 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.98□□□□□ -1.77
CNOT4O95628 VN1R85P-201ENST00000601587 426 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 AL110115.1-201ENST00000614396 364 ntBASIC3.98□□□□□ -1.77
CNOT4O95628 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CNOT4O95628 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 Y_RNA.106-201ENST00000363189 100 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 RNU6-288P-201ENST00000363690 104 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 Y_RNA.210-201ENST00000364161 110 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 RNU6-1303P-201ENST00000364841 107 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 RNU1-64P-201ENST00000365443 163 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 Y_RNA.396-201ENST00000383949 103 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 RNU4-70P-201ENST00000384579 139 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 RNU6-713P-201ENST00000384761 107 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 AL160275.2-201ENST00000412010 394 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.97□□□□□ -1.77
CNOT4O95628 AC011998.1-201ENST00000433403 117 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AL591212.2-201ENST00000433923 257 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 HMGN2P20-201ENST00000437531 273 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 RPL26P6-201ENST00000440913 438 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 OSTCP8-201ENST00000445117 448 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AC012671.1-201ENST00000451912 203 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.97□□□□□ -1.77
CNOT4O95628 AC114801.2-201ENST00000503825 781 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AC069113.1-201ENST00000517763 267 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 OR4H12P-201ENST00000556269 907 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AC109446.1-201ENST00000566172 220 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.97□□□□□ -1.77
CNOT4O95628 Z98751.3-201ENST00000604447 521 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 ELOCP5-201ENST00000604924 333 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 MIR8058-201ENST00000615737 89 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AL391261.4-201ENST00000616012 481 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 MIR8062-201ENST00000621515 85 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 AC140113.4-201ENST00000622087 222 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 AC139769.1-204ENST00000472297 1931 ntBASIC3.97□□□□□ -1.77
CNOT4O95628 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.97□□□□□ -1.77
CNOT4O95628 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNOT4O95628 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.96□□□□□ -1.77
CNOT4O95628 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.96□□□□□ -1.77
CNOT4O95628 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CNOT4O95628 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CNOT4O95628 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.96□□□□□ -1.78
CNOT4O95628 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 Y_RNA.151-201ENST00000363566 112 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 Y_RNA.314-201ENST00000365114 102 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RNU6-1329P-201ENST00000365664 107 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 MIR493-201ENST00000385254 89 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 MIR591-201ENST00000385290 95 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 SNORD96B-201ENST00000386148 79 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms