Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAMP4O75379 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.6□□□□□ -1.67
VAMP4O75379 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VAMP4O75379 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.6□□□□□ -1.67
VAMP4O75379 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VAMP4O75379 Y_RNA.31-201ENST00000362574 102 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 RNU6-601P-201ENST00000384540 107 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 AL583834.1-201ENST00000406943 343 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
VAMP4O75379 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.6□□□□□ -1.67
VAMP4O75379 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.6□□□□□ -1.67
VAMP4O75379 RPL9P32-201ENST00000464118 620 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.6□□□□□ -1.67
VAMP4O75379 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.6□□□□□ -1.67
VAMP4O75379 AC023141.12-201ENST00000512399 199 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.6□□□□□ -1.67
VAMP4O75379 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.6□□□□□ -1.67
VAMP4O75379 RNU6-988P-201ENST00000519081 107 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 CYCSP27-201ENST00000527643 293 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 MIR1254-2-201ENST00000579553 63 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 ATP1B3P1-201ENST00000605365 821 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.6□□□□□ -1.67
VAMP4O75379 SDR42E1P2-201ENST00000614861 481 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 RMST_9.1-201ENST00000619945 193 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.6□□□□□ -1.67
VAMP4O75379 MTND5P16-201ENST00000460269 1703 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAMP4O75379 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
VAMP4O75379 AC090337.1-201ENST00000579651 2074 ntBASIC4.6□□□□□ -1.67
VAMP4O75379 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VAMP4O75379 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
VAMP4O75379 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VAMP4O75379 RNU6-562P-201ENST00000362731 107 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 RNU6-715P-201ENST00000365204 103 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 RNU6-817P-201ENST00000391083 104 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 U3.39-201ENST00000408569 239 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 RN7SKP53-201ENST00000411337 315 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 RAC1P3-201ENST00000416129 580 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 SSXP9-201ENST00000417503 292 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 CYP4F29P-201ENST00000420685 446 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 RPL31P12-201ENST00000422587 358 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 MTND5P19-201ENST00000424872 1794 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.59□□□□□ -1.67
VAMP4O75379 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.59□□□□□ -1.67
VAMP4O75379 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.59□□□□□ -1.67
VAMP4O75379 AC008264.1-201ENST00000447612 367 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.59□□□□□ -1.67
VAMP4O75379 SNORD105B-201ENST00000458770 79 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 RNU6-953P-201ENST00000459154 107 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VAMP4O75379 AP004242.1-201ENST00000533701 349 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.59□□□□□ -1.67
VAMP4O75379 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.59□□□□□ -1.67
VAMP4O75379 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.59□□□□□ -1.67
VAMP4O75379 AC007619.2-201ENST00000605743 379 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.59□□□□□ -1.67
VAMP4O75379 AC010378.1-201ENST00000619270 362 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 MTND5P42-201ENST00000637720 498 ntBASIC4.59□□□□□ -1.67
VAMP4O75379 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VAMP4O75379 USP8P1-201ENST00000494673 3183 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP4O75379 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RNU6-76P-201ENST00000384060 104 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RNU6-190P-201ENST00000384154 102 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RNU6-328P-201ENST00000390887 106 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RNU6-882P-201ENST00000391025 103 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP4O75379 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP4O75379 HSPD1P21-201ENST00000436541 245 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RPL7P28-201ENST00000437739 740 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP4O75379 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP4O75379 RBMY2UP-201ENST00000453474 324 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 MTCO3P10-201ENST00000455912 772 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RPL30P15-201ENST00000457129 321 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 U3.44-201ENST00000458938 192 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 RPL7P42-201ENST00000481005 679 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 SNORA31.22-201ENST00000517204 135 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP4O75379 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP4O75379 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.58□□□□□ -1.68
VAMP4O75379 AP000654.2-201ENST00000605633 586 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.58□□□□□ -1.68
VAMP4O75379 AL355365.1-201ENST00000616480 294 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAMP4O75379 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP4O75379 HSPA8P4-201ENST00000511877 1920 ntBASIC4.58□□□□□ -1.68
VAMP4O75379 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.58□□□□□ -1.68
VAMP4O75379 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP4O75379 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
VAMP4O75379 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP4O75379 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.57□□□□□ -1.68
VAMP4O75379 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP4O75379 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
VAMP4O75379 SNORA62.3-201ENST00000365110 153 ntBASIC4.57□□□□□ -1.68
VAMP4O75379 AL359837.1-201ENST00000381357 287 ntBASIC4.57□□□□□ -1.68
VAMP4O75379 AC117470.1-201ENST00000381974 330 ntBASIC4.57□□□□□ -1.68
VAMP4O75379 CISD1P1-201ENST00000393907 327 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms