Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-952P-201ENST00000391164 108 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 USP9YP6-201ENST00000413550 854 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 RPL26P27-201ENST00000414397 437 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.89□□□□□ -2.11
SHOX2O60902 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.89□□□□□ -2.11
SHOX2O60902 EIF4EP4-201ENST00000424916 578 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.89□□□□□ -2.11
SHOX2O60902 IFNA20P-201ENST00000436840 528 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 DNAJC19P4-201ENST00000440115 345 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 MTND4LP16-201ENST00000440828 295 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 AC016691.1-201ENST00000441321 413 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.89□□□□□ -2.11
SHOX2O60902 KLF3P2-201ENST00000465138 268 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 DYNLL1P5-201ENST00000467158 270 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 BZW1P2-201ENST00000473537 826 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 TRBV1-201ENST00000476502 284 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 AC069528.1-202ENST00000482888 637 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.89□□□□□ -2.11
SHOX2O60902 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.89□□□□□ -2.11
SHOX2O60902 AC092436.3-201ENST00000511788 257 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 RNU6-1028P-201ENST00000517164 93 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.89□□□□□ -2.11
SHOX2O60902 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.89□□□□□ -2.11
SHOX2O60902 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.89□□□□□ -2.11
SHOX2O60902 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.89□□□□□ -2.11
SHOX2O60902 AP005136.1-201ENST00000579765 429 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 AC024619.4-201ENST00000580924 316 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 AP002802.2-201ENST00000605877 235 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 TUG1_2.1-201ENST00000614234 87 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.89□□□□□ -2.11
SHOX2O60902 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
SHOX2O60902 AP003400.5-201ENST00000624827 617 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.89□□□□□ -2.11
SHOX2O60902 AC025048.6-202ENST00000627667 438 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SHOX2O60902 Y_RNA.224-201ENST00000364308 111 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 RPS20P15-201ENST00000412792 311 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 BX119904.4-201ENST00000424402 301 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.88□□□□□ -2.11
SHOX2O60902 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SHOX2O60902 HMGN1P5-201ENST00000448591 263 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 AL121769.1-201ENST00000469473 401 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 AC072039.1-201ENST00000477611 581 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.88□□□□□ -2.11
SHOX2O60902 AC110760.3-202ENST00000515177 371 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 SNORA31.6-201ENST00000516241 130 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 HSPE1P18-201ENST00000517602 280 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.88□□□□□ -2.11
SHOX2O60902 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SHOX2O60902 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.88□□□□□ -2.11
SHOX2O60902 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.88□□□□□ -2.11
SHOX2O60902 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.88□□□□□ -2.11
SHOX2O60902 SNRPGP18-201ENST00000553000 214 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 YWHAEP7-203ENST00000622054 312 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 MTND5P29-201ENST00000458676 1807 ntBASIC1.88□□□□□ -2.11
SHOX2O60902 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHOX2O60902 Y_RNA.245-201ENST00000364493 95 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 RNU1-73P-201ENST00000383971 164 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 RNU6-432P-201ENST00000384196 109 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 RNY1P14-201ENST00000384426 108 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 SNORA26.9-201ENST00000391322 122 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 FGF7P8-201ENST00000402994 292 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 U6atac.2-201ENST00000408644 118 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AC068533.2-201ENST00000411872 306 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.87□□□□□ -2.11
SHOX2O60902 USP9YP21-201ENST00000420603 432 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.87□□□□□ -2.11
SHOX2O60902 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.87□□□□□ -2.11
SHOX2O60902 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.87□□□□□ -2.11
SHOX2O60902 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.87□□□□□ -2.11
SHOX2O60902 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.87□□□□□ -2.11
SHOX2O60902 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.87□□□□□ -2.11
SHOX2O60902 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SHOX2O60902 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.87□□□□□ -2.11
SHOX2O60902 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SHOX2O60902 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.87□□□□□ -2.11
SHOX2O60902 RNU6-927P-201ENST00000516199 100 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 MRPS36P5-201ENST00000551909 298 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AL133241.1-201ENST00000556832 487 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AC105245.1-201ENST00000581934 244 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.87□□□□□ -2.11
SHOX2O60902 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.87□□□□□ -2.11
SHOX2O60902 uc_338.14-201ENST00000613162 166 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AP001486.3-201ENST00000615334 372 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AC231657.1-201ENST00000624313 397 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 AL356094.1-201ENST00000624663 1212 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 U2.21-201ENST00000637295 81 ntBASIC1.87□□□□□ -2.11
SHOX2O60902 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SHOX2O60902 AC092447.10-201ENST00000620607 1652 ntBASIC1.86□□□□□ -2.11
SHOX2O60902 AC104454.1-201ENST00000421341 1401 ntBASIC1.86□□□□□ -2.11
SHOX2O60902 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.86□□□□□ -2.11
SHOX2O60902 RNA5SP125-201ENST00000364843 120 ntBASIC1.86□□□□□ -2.11
SHOX2O60902 RNU6-114P-201ENST00000384704 105 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms