Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PROM1O43490 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PROM1O43490 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PROM1O43490 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PROM1O43490 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.7□□□□□ -1.82
PROM1O43490 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.7□□□□□ -1.82
PROM1O43490 RNU1-18P-201ENST00000363062 164 ntBASIC3.7□□□□□ -1.82
PROM1O43490 RNU6-715P-201ENST00000365204 103 ntBASIC3.7□□□□□ -1.82
PROM1O43490 RNU6-328P-201ENST00000390887 106 ntBASIC3.7□□□□□ -1.82
PROM1O43490 SNORA16.2-201ENST00000390991 127 ntBASIC3.7□□□□□ -1.82
PROM1O43490 RN7SKP158-201ENST00000410453 326 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 RANP8-201ENST00000444720 713 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.7□□□□□ -1.82
PROM1O43490 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.7□□□□□ -1.82
PROM1O43490 RPL21P11-201ENST00000461458 483 ntBASIC3.7□□□□□ -1.82
PROM1O43490 MTND5P5-201ENST00000503764 376 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.7□□□□□ -1.82
PROM1O43490 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.7□□□□□ -1.82
PROM1O43490 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.7□□□□□ -1.82
PROM1O43490 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.7□□□□□ -1.82
PROM1O43490 AC007151.1-201ENST00000572774 483 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PROM1O43490 AC006504.6-201ENST00000590142 199 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AC124303.1-201ENST00000605703 360 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.7□□□□□ -1.82
PROM1O43490 U7.8-201ENST00000619968 63 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AL360181.4-201ENST00000621752 134 ntBASIC3.7□□□□□ -1.82
PROM1O43490 AC039056.2-201ENST00000622261 511 ntBASIC3.7□□□□□ -1.82
PROM1O43490 CR392039.5-201ENST00000623201 510 ntBASIC3.7□□□□□ -1.82
PROM1O43490 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
PROM1O43490 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
PROM1O43490 AC091152.2-201ENST00000591628 2569 ntBASIC3.69□□□□□ -1.82
PROM1O43490 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PROM1O43490 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PROM1O43490 Y_RNA.146-201ENST00000363549 102 ntBASIC3.69□□□□□ -1.82
PROM1O43490 Y_RNA.212-201ENST00000364177 102 ntBASIC3.69□□□□□ -1.82
PROM1O43490 SNORD42.2-201ENST00000365570 69 ntBASIC3.69□□□□□ -1.82
PROM1O43490 RNU6-434P-201ENST00000384376 107 ntBASIC3.69□□□□□ -1.82
PROM1O43490 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
PROM1O43490 RPS4XP7-201ENST00000406274 780 ntBASIC3.69□□□□□ -1.82
PROM1O43490 RPL5P18-201ENST00000406671 891 ntBASIC3.69□□□□□ -1.82
PROM1O43490 HSPE1P8-201ENST00000406997 288 ntBASIC3.69□□□□□ -1.82
PROM1O43490 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
PROM1O43490 MRPS31P2-201ENST00000451581 518 ntBASIC3.69□□□□□ -1.82
PROM1O43490 RPL30P15-201ENST00000457129 321 ntBASIC3.69□□□□□ -1.82
PROM1O43490 RNU6-953P-201ENST00000459154 107 ntBASIC3.69□□□□□ -1.82
PROM1O43490 AC130509.1-201ENST00000464158 433 ntBASIC3.69□□□□□ -1.82
PROM1O43490 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PROM1O43490 AC090096.1-201ENST00000489168 390 ntBASIC3.69□□□□□ -1.82
PROM1O43490 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.69□□□□□ -1.82
PROM1O43490 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.69□□□□□ -1.82
PROM1O43490 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.69□□□□□ -1.82
PROM1O43490 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.69□□□□□ -1.82
PROM1O43490 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PROM1O43490 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.69□□□□□ -1.82
PROM1O43490 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.69□□□□□ -1.82
PROM1O43490 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.69□□□□□ -1.82
PROM1O43490 AC006116.10-201ENST00000591836 581 ntBASIC3.69□□□□□ -1.82
PROM1O43490 AL080274.1-201ENST00000605565 220 ntBASIC3.69□□□□□ -1.82
PROM1O43490 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.69□□□□□ -1.82
PROM1O43490 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.69□□□□□ -1.82
PROM1O43490 AL391261.4-201ENST00000616012 481 ntBASIC3.69□□□□□ -1.82
PROM1O43490 XIST_intron.1-201ENST00000619444 68 ntBASIC3.69□□□□□ -1.82
PROM1O43490 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PROM1O43490 MIR6500-201ENST00000622700 86 ntBASIC3.69□□□□□ -1.82
PROM1O43490 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.69□□□□□ -1.82
PROM1O43490 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PROM1O43490 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 AC118273.1-201ENST00000525324 3006 ntBASIC3.68□□□□□ -1.82
PROM1O43490 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.68□□□□□ -1.82
PROM1O43490 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 Y_RNA.202-201ENST00000364083 110 ntBASIC3.68□□□□□ -1.82
PROM1O43490 RNU6-213P-201ENST00000384051 104 ntBASIC3.68□□□□□ -1.82
PROM1O43490 RNU6-76P-201ENST00000384060 104 ntBASIC3.68□□□□□ -1.82
PROM1O43490 MIR449B-201ENST00000384995 97 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
PROM1O43490 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.68□□□□□ -1.82
PROM1O43490 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.68□□□□□ -1.82
PROM1O43490 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.68□□□□□ -1.82
PROM1O43490 HMGB1P27-201ENST00000431429 603 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AL591212.2-201ENST00000433923 257 ntBASIC3.68□□□□□ -1.82
PROM1O43490 FABP5P14-201ENST00000437273 393 ntBASIC3.68□□□□□ -1.82
PROM1O43490 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.68□□□□□ -1.82
PROM1O43490 Y_RNA.639-201ENST00000458981 102 ntBASIC3.68□□□□□ -1.82
PROM1O43490 VN1R104P-201ENST00000505115 1009 ntBASIC3.68□□□□□ -1.82
PROM1O43490 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.68□□□□□ -1.82
PROM1O43490 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 AC093303.1-201ENST00000514549 295 ntBASIC3.68□□□□□ -1.82
PROM1O43490 ERHP1-201ENST00000523006 310 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms