Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RPL21P13-201ENST00000488305 481 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 HMGB1P30-201ENST00000492455 606 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 FAM92A1P2-202ENST00000504766 877 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 RBBP4P6-201ENST00000508098 202 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 RNA5SP165-201ENST00000517142 115 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC107934.2-201ENST00000518653 310 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.9□□□□□ -1.79
PRPF3O43395 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.9□□□□□ -1.79
PRPF3O43395 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 HIF1AP1-201ENST00000553642 175 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC005476.1-201ENST00000554427 397 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 AC068135.2-201ENST00000569293 1028 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 MIR5047-201ENST00000579212 100 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 BNIP3P30-201ENST00000601184 574 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AP000907.4-201ENST00000604143 237 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC004852.3-201ENST00000614131 326 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 XIST_intron.1-201ENST00000619444 68 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.9□□□□□ -1.79
PRPF3O43395 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF3O43395 AC007256.1-201ENST00000392253 2765 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 RIOK3P1-201ENST00000418778 1528 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
PRPF3O43395 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF3O43395 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF3O43395 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF3O43395 SNORA71.3-201ENST00000362582 128 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 Y_RNA.89-201ENST00000363031 102 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 MIR183-201ENST00000384958 110 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 SNORD37.1-201ENST00000390968 65 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 UBE2V1P2-201ENST00000397758 440 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AL354719.1-201ENST00000406535 843 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AL606923.1-201ENST00000406616 190 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 RNU6-55P-201ENST00000411092 107 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 RNU6-954P-201ENST00000411355 107 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AL356968.1-201ENST00000416622 474 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 RPL7P10-201ENST00000417407 739 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 MTND1P2-201ENST00000430604 821 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 RBMX2P4-201ENST00000441256 376 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PRPF3O43395 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF3O43395 CECR9-201ENST00000453421 199 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 CACYBPP2-201ENST00000453625 678 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 CENPBD1P1-201ENST00000464061 469 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AC008155.2-201ENST00000464337 397 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AP002884.2-201ENST00000471647 395 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 RPL7P47-201ENST00000497299 556 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AC092436.1-201ENST00000506450 503 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF3O43395 RNU4-29P-201ENST00000515943 174 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.89□□□□□ -1.79
PRPF3O43395 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF3O43395 MTND4P7-201ENST00000523876 130 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AL163153.1-201ENST00000554223 283 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF3O43395 AC106782.4-201ENST00000568264 210 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AC015917.1-201ENST00000579654 510 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF3O43395 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.89□□□□□ -1.79
PRPF3O43395 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF3O43395 AC024940.5-201ENST00000622889 474 ntBASIC3.89□□□□□ -1.79
PRPF3O43395 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF3O43395 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF3O43395 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF3O43395 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF3O43395 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PRPF3O43395 RNU6-525P-201ENST00000363685 104 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 RNU6-82P-201ENST00000363970 107 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 RNU1-33P-201ENST00000364249 162 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 Y_RNA.295-201ENST00000364918 102 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 RNU6-116P-201ENST00000384042 109 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 RNU6-434P-201ENST00000384376 107 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 MIR7-3-201ENST00000384898 110 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AL592114.1-201ENST00000403842 483 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AC063979.1-201ENST00000415539 377 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF3O43395 MTCO3P18-201ENST00000440206 761 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 NDUFB1P2-201ENST00000449477 176 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AL118520.1-201ENST00000450770 291 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF3O43395 RPL21P41-201ENST00000459863 264 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 RPL31P58-201ENST00000469001 379 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AC128713.1-201ENST00000471495 306 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AC008716.1-201ENST00000511084 513 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF3O43395 SNORD59.2-201ENST00000516873 68 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF3O43395 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF3O43395 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF3O43395 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF3O43395 AC234778.2-201ENST00000566241 354 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 MIR3186-201ENST00000577404 85 ntBASIC3.88□□□□□ -1.79
PRPF3O43395 AC002553.4-201ENST00000616896 331 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms