Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH4O15457 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.41□□□□□ -2.02
MSH4O15457 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.41□□□□□ -2.02
MSH4O15457 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH4O15457 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MSH4O15457 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MSH4O15457 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.41□□□□□ -2.02
MSH4O15457 MTND1P24-201ENST00000552175 861 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH4O15457 AC103810.1-201ENST00000579873 453 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH4O15457 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.41□□□□□ -2.02
MSH4O15457 KC877982.1-201ENST00000602313 470 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AL161734.1-201ENST00000609720 557 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AC034102.8-201ENST00000615146 484 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AC007671.2-201ENST00000637344 619 ntBASIC2.41□□□□□ -2.02
MSH4O15457 ZNF271P-202ENST00000465539 1970 ntBASIC2.41□□□□□ -2.02
MSH4O15457 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.41□□□□□ -2.02
MSH4O15457 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
MSH4O15457 AL079342.1-201ENST00000401460 267 ntBASIC2.4□□□□□ -2.03
MSH4O15457 RPS20P2-201ENST00000402520 389 ntBASIC2.4□□□□□ -2.03
MSH4O15457 ELOCP17-201ENST00000414751 326 ntBASIC2.4□□□□□ -2.03
MSH4O15457 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.4□□□□□ -2.03
MSH4O15457 AC005005.2-201ENST00000420779 380 ntBASIC2.4□□□□□ -2.03
MSH4O15457 RPS27AP14-201ENST00000422868 454 ntBASIC2.4□□□□□ -2.03
MSH4O15457 RPL37P21-201ENST00000435890 276 ntBASIC2.4□□□□□ -2.03
MSH4O15457 AL591719.1-201ENST00000444669 744 ntBASIC2.4□□□□□ -2.03
MSH4O15457 GDI2P2-201ENST00000445131 608 ntBASIC2.4□□□□□ -2.03
MSH4O15457 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.4□□□□□ -2.03
MSH4O15457 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.4□□□□□ -2.03
MSH4O15457 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.4□□□□□ -2.03
MSH4O15457 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.4□□□□□ -2.03
MSH4O15457 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.4□□□□□ -2.03
MSH4O15457 RPF2P2-201ENST00000504693 896 ntBASIC2.4□□□□□ -2.03
MSH4O15457 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
MSH4O15457 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.4□□□□□ -2.03
MSH4O15457 RNU6-1003P-201ENST00000517099 105 ntBASIC2.4□□□□□ -2.03
MSH4O15457 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.4□□□□□ -2.03
MSH4O15457 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.4□□□□□ -2.03
MSH4O15457 MIR5002-201ENST00000584713 97 ntBASIC2.4□□□□□ -2.03
MSH4O15457 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.4□□□□□ -2.03
MSH4O15457 OR1M4P-201ENST00000589199 287 ntBASIC2.4□□□□□ -2.03
MSH4O15457 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.4□□□□□ -2.03
MSH4O15457 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.4□□□□□ -2.03
MSH4O15457 AL391813.2-201ENST00000609113 322 ntBASIC2.4□□□□□ -2.03
MSH4O15457 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.4□□□□□ -2.03
MSH4O15457 MIR6715A-201ENST00000615929 79 ntBASIC2.4□□□□□ -2.03
MSH4O15457 AC010378.1-201ENST00000619270 362 ntBASIC2.4□□□□□ -2.03
MSH4O15457 CU459211.1-201ENST00000635667 749 ntBASIC2.4□□□□□ -2.03
MSH4O15457 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
MSH4O15457 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
MSH4O15457 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MSH4O15457 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MSH4O15457 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.03
MSH4O15457 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.4□□□□□ -2.03
MSH4O15457 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MSH4O15457 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
MSH4O15457 UBE2L2-201ENST00000254302 429 ntBASIC2.39□□□□□ -2.03
MSH4O15457 RNU6-512P-201ENST00000364438 103 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
MSH4O15457 RNU6-809P-201ENST00000384461 107 ntBASIC2.39□□□□□ -2.03
MSH4O15457 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MSH4O15457 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.39□□□□□ -2.03
MSH4O15457 RNU2-68P-201ENST00000410878 191 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.39□□□□□ -2.03
MSH4O15457 AC104651.1-201ENST00000427559 735 ntBASIC2.39□□□□□ -2.03
MSH4O15457 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MSH4O15457 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.39□□□□□ -2.03
MSH4O15457 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.39□□□□□ -2.03
MSH4O15457 HMGB1P27-201ENST00000431429 603 ntBASIC2.39□□□□□ -2.03
MSH4O15457 GPM6BP2-201ENST00000432046 144 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AL008629.1-201ENST00000438615 184 ntBASIC2.39□□□□□ -2.03
MSH4O15457 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.39□□□□□ -2.03
MSH4O15457 GPM6BP1-201ENST00000446387 144 ntBASIC2.39□□□□□ -2.03
MSH4O15457 DPPA3P1-201ENST00000448050 469 ntBASIC2.39□□□□□ -2.03
MSH4O15457 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.39□□□□□ -2.03
MSH4O15457 AC073901.1-201ENST00000462471 408 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
MSH4O15457 RPS27AP10-201ENST00000496103 208 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.39□□□□□ -2.03
MSH4O15457 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.39□□□□□ -2.03
MSH4O15457 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.39□□□□□ -2.03
MSH4O15457 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.39□□□□□ -2.03
MSH4O15457 AC123904.2-201ENST00000548059 300 ntBASIC2.39□□□□□ -2.03
MSH4O15457 MIR3146-201ENST00000580367 79 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.39□□□□□ -2.03
MSH4O15457 AP000403.1-201ENST00000603349 851 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AC108747.1-201ENST00000609508 535 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AL356266.1-201ENST00000623311 483 ntBASIC2.39□□□□□ -2.03
MSH4O15457 AC092192.1-201ENST00000633154 1018 ntBASIC2.39□□□□□ -2.03
MSH4O15457 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MSH4O15457 AC104454.1-201ENST00000421341 1401 ntBASIC2.39□□□□□ -2.03
MSH4O15457 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
MSH4O15457 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.39□□□□□ -2.03
MSH4O15457 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.39□□□□□ -2.03
MSH4O15457 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.39□□□□□ -2.03
MSH4O15457 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MSH4O15457 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.39□□□□□ -2.03
MSH4O15457 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms