Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM1O15116 AC093106.2-201ENST00000428212 385 ntBASIC2.11□□□□□ -2.07
LSM1O15116 FABP5P14-201ENST00000437273 393 ntBASIC2.11□□□□□ -2.07
LSM1O15116 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM1O15116 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM1O15116 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
LSM1O15116 AC134050.1-201ENST00000495088 933 ntBASIC2.11□□□□□ -2.07
LSM1O15116 AF213884.2-201ENST00000510417 903 ntBASIC2.11□□□□□ -2.07
LSM1O15116 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM1O15116 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.11□□□□□ -2.07
LSM1O15116 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM1O15116 CBX3P7-201ENST00000532876 502 ntBASIC2.11□□□□□ -2.07
LSM1O15116 AL121821.2-201ENST00000556081 394 ntBASIC2.11□□□□□ -2.07
LSM1O15116 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
LSM1O15116 AC091057.3-201ENST00000602684 733 ntBASIC2.11□□□□□ -2.07
LSM1O15116 AC026790.2-201ENST00000606282 430 ntBASIC2.11□□□□□ -2.07
LSM1O15116 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM1O15116 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.11□□□□□ -2.07
LSM1O15116 AP001486.3-201ENST00000615334 372 ntBASIC2.11□□□□□ -2.07
LSM1O15116 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LSM1O15116 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
LSM1O15116 AC243829.7-201ENST00000633081 225 ntBASIC2.11□□□□□ -2.07
LSM1O15116 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM1O15116 CDC27P3-201ENST00000635418 1910 ntBASIC2.11□□□□□ -2.07
LSM1O15116 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM1O15116 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM1O15116 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LSM1O15116 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LSM1O15116 RNU6-486P-201ENST00000363116 107 ntBASIC2.1□□□□□ -2.07
LSM1O15116 RNU6-433P-201ENST00000363216 104 ntBASIC2.1□□□□□ -2.07
LSM1O15116 RNU4-92P-201ENST00000363783 136 ntBASIC2.1□□□□□ -2.07
LSM1O15116 RNU6-769P-201ENST00000384407 104 ntBASIC2.1□□□□□ -2.07
LSM1O15116 RNU6-658P-201ENST00000384606 106 ntBASIC2.1□□□□□ -2.07
LSM1O15116 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LSM1O15116 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
LSM1O15116 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM1O15116 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM1O15116 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM1O15116 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM1O15116 Z98742.2-201ENST00000431564 187 ntBASIC2.1□□□□□ -2.07
LSM1O15116 LARP1BP3-201ENST00000437229 869 ntBASIC2.1□□□□□ -2.07
LSM1O15116 SDR42E1P3-201ENST00000438345 502 ntBASIC2.1□□□□□ -2.07
LSM1O15116 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM1O15116 MTATP6P14-201ENST00000455189 673 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AP001324.2-201ENST00000461163 319 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM1O15116 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM1O15116 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
LSM1O15116 MRPS33P3-201ENST00000513456 322 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM1O15116 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
LSM1O15116 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AP006587.4-201ENST00000526053 529 ntBASIC2.1□□□□□ -2.07
LSM1O15116 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LSM1O15116 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM1O15116 RPS3AP4-201ENST00000555161 764 ntBASIC2.1□□□□□ -2.07
LSM1O15116 DUXAP1-201ENST00000556632 463 ntBASIC2.1□□□□□ -2.07
LSM1O15116 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM1O15116 AC022662.1-201ENST00000580252 331 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM1O15116 AL592221.1-201ENST00000605266 382 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AC080013.3-201ENST00000606839 578 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AC097468.3-201ENST00000607956 456 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM1O15116 AL136981.2-201ENST00000617319 734 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LSM1O15116 AC025034.2-201ENST00000623264 286 ntBASIC2.1□□□□□ -2.07
LSM1O15116 AL136313.1-201ENST00000624804 202 ntBASIC2.1□□□□□ -2.07
LSM1O15116 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM1O15116 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LSM1O15116 RNU6-19P-201ENST00000384718 107 ntBASIC2.09□□□□□ -2.07
LSM1O15116 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LSM1O15116 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
LSM1O15116 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.09□□□□□ -2.07
LSM1O15116 OR51A5P-201ENST00000415429 942 ntBASIC2.09□□□□□ -2.07
LSM1O15116 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM1O15116 AC005005.2-201ENST00000420779 380 ntBASIC2.09□□□□□ -2.07
LSM1O15116 PTGES3P4-201ENST00000426243 356 ntBASIC2.09□□□□□ -2.07
LSM1O15116 BRK1P2-201ENST00000442875 223 ntBASIC2.09□□□□□ -2.07
LSM1O15116 AC124916.1-201ENST00000444020 547 ntBASIC2.09□□□□□ -2.07
LSM1O15116 OR6C5P-201ENST00000452388 923 ntBASIC2.09□□□□□ -2.07
LSM1O15116 AP001486.1-201ENST00000463339 476 ntBASIC2.09□□□□□ -2.07
LSM1O15116 RPL7P18-201ENST00000478965 734 ntBASIC2.09□□□□□ -2.07
LSM1O15116 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.09□□□□□ -2.07
LSM1O15116 RNA5SP112-201ENST00000515937 99 ntBASIC2.09□□□□□ -2.07
LSM1O15116 RNU2-44P-201ENST00000516795 194 ntBASIC2.09□□□□□ -2.07
LSM1O15116 RNU6-1183P-201ENST00000517054 60 ntBASIC2.09□□□□□ -2.07
LSM1O15116 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
LSM1O15116 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM1O15116 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM1O15116 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM1O15116 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM1O15116 AP001646.1-201ENST00000527936 915 ntBASIC2.09□□□□□ -2.07
LSM1O15116 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
LSM1O15116 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM1O15116 OR11H5P-201ENST00000554039 926 ntBASIC2.09□□□□□ -2.07
LSM1O15116 MIR3167-201ENST00000579623 85 ntBASIC2.09□□□□□ -2.07
LSM1O15116 LRRC37A5P-203ENST00000580181 585 ntBASIC2.09□□□□□ -2.07
LSM1O15116 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.09□□□□□ -2.07
LSM1O15116 AL358072.1-201ENST00000604156 575 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms