Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC121334.2-201ENST00000605387 271 ntBASIC2.54□□□□□ -2
CDX4O14627 SDR42E1P2-201ENST00000614861 481 ntBASIC2.54□□□□□ -2
CDX4O14627 AC008250.2-201ENST00000615261 205 ntBASIC2.54□□□□□ -2
CDX4O14627 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDX4O14627 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.54□□□□□ -2
CDX4O14627 TPTE2P4-201ENST00000258589 1605 ntBASIC2.53□□□□□ -2
CDX4O14627 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.53□□□□□ -2
CDX4O14627 DYNLT3P1-201ENST00000378574 347 ntBASIC2.53□□□□□ -2
CDX4O14627 RNU6-1042P-201ENST00000384204 107 ntBASIC2.53□□□□□ -2
CDX4O14627 RNU6-517P-201ENST00000384362 110 ntBASIC2.53□□□□□ -2
CDX4O14627 SNORD115.1-201ENST00000391109 76 ntBASIC2.53□□□□□ -2
CDX4O14627 RNU6-248P-201ENST00000410720 107 ntBASIC2.53□□□□□ -2
CDX4O14627 RNU2-62P-201ENST00000410868 191 ntBASIC2.53□□□□□ -2
CDX4O14627 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
CDX4O14627 ELOCP17-201ENST00000414751 326 ntBASIC2.53□□□□□ -2
CDX4O14627 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.53□□□□□ -2
CDX4O14627 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDX4O14627 AL353777.1-201ENST00000425552 326 ntBASIC2.53□□□□□ -2
CDX4O14627 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDX4O14627 DPPA2P1-201ENST00000428060 556 ntBASIC2.53□□□□□ -2
CDX4O14627 USP12PX-201ENST00000432383 1057 ntBASIC2.53□□□□□ -2
CDX4O14627 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.53□□□□□ -2
CDX4O14627 FCF1P1-201ENST00000432690 571 ntBASIC2.53□□□□□ -2
CDX4O14627 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.53□□□□□ -2
CDX4O14627 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.53□□□□□ -2
CDX4O14627 AL049734.2-201ENST00000441066 616 ntBASIC2.53□□□□□ -2
CDX4O14627 AC104058.1-201ENST00000448028 297 ntBASIC2.53□□□□□ -2
CDX4O14627 AL590664.1-201ENST00000448065 339 ntBASIC2.53□□□□□ -2
CDX4O14627 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.53□□□□□ -2
CDX4O14627 AL353705.4-201ENST00000449661 238 ntBASIC2.53□□□□□ -2
CDX4O14627 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.53□□□□□ -2
CDX4O14627 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.53□□□□□ -2
CDX4O14627 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDX4O14627 AL031183.1-201ENST00000457667 207 ntBASIC2.53□□□□□ -2
CDX4O14627 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.53□□□□□ -2
CDX4O14627 RPL21P41-201ENST00000459863 264 ntBASIC2.53□□□□□ -2
CDX4O14627 RPL7P5-201ENST00000471472 736 ntBASIC2.53□□□□□ -2
CDX4O14627 RPL31P60-201ENST00000478450 367 ntBASIC2.53□□□□□ -2
CDX4O14627 RPL9P33-201ENST00000484311 566 ntBASIC2.53□□□□□ -2
CDX4O14627 AC138853.1-201ENST00000503549 823 ntBASIC2.53□□□□□ -2
CDX4O14627 KCTD9P5-201ENST00000504141 1170 ntBASIC2.53□□□□□ -2
CDX4O14627 RN7SKP43-201ENST00000516173 320 ntBASIC2.53□□□□□ -2
CDX4O14627 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.53□□□□□ -2
CDX4O14627 AC100870.1-201ENST00000522035 505 ntBASIC2.53□□□□□ -2
CDX4O14627 DEFB108A-201ENST00000530110 222 ntBASIC2.53□□□□□ -2
CDX4O14627 AC022878.1-201ENST00000530684 149 ntBASIC2.53□□□□□ -2
CDX4O14627 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.53□□□□□ -2
CDX4O14627 AC243972.3-201ENST00000539655 198 ntBASIC2.53□□□□□ -2
CDX4O14627 AL356432.3-201ENST00000568952 465 ntBASIC2.53□□□□□ -2
CDX4O14627 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.53□□□□□ -2
CDX4O14627 AC137800.2-201ENST00000574375 120 ntBASIC2.53□□□□□ -2
CDX4O14627 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.53□□□□□ -2
CDX4O14627 AC131902.3-201ENST00000611767 581 ntBASIC2.53□□□□□ -2
CDX4O14627 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.53□□□□□ -2
CDX4O14627 AC012150.2-201ENST00000621300 544 ntBASIC2.53□□□□□ -2
CDX4O14627 AC010338.1-201ENST00000621823 717 ntBASIC2.53□□□□□ -2
CDX4O14627 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.53□□□□□ -2
CDX4O14627 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDX4O14627 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.53□□□□□ -2
CDX4O14627 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.53□□□□□ -2
CDX4O14627 AC006020.1-201ENST00000420179 1854 ntBASIC2.53□□□□□ -2
CDX4O14627 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDX4O14627 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CDX4O14627 MAPK10-322ENST00000641485 4530 ntBASIC2.52□□□□□ -2.01
CDX4O14627 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.52□□□□□ -2.01
CDX4O14627 RNU6-259P-201ENST00000383999 107 ntBASIC2.52□□□□□ -2.01
CDX4O14627 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CDX4O14627 RPS3AP36-201ENST00000398190 775 ntBASIC2.52□□□□□ -2.01
CDX4O14627 RPS20P2-201ENST00000402520 389 ntBASIC2.52□□□□□ -2.01
CDX4O14627 RNU4-26P-201ENST00000410270 107 ntBASIC2.52□□□□□ -2.01
CDX4O14627 Y_RNA.608-201ENST00000410647 95 ntBASIC2.52□□□□□ -2.01
CDX4O14627 RPS3AP3-201ENST00000411933 242 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX4O14627 RPL21P24-201ENST00000413752 448 ntBASIC2.52□□□□□ -2.01
CDX4O14627 UBE2V1P10-201ENST00000414685 269 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.52□□□□□ -2.01
CDX4O14627 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX4O14627 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX4O14627 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX4O14627 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX4O14627 MTND1P4-201ENST00000435196 415 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC009237.8-201ENST00000445492 379 ntBASIC2.52□□□□□ -2.01
CDX4O14627 HIGD1AP2-201ENST00000446367 280 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX4O14627 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.52□□□□□ -2.01
CDX4O14627 AL359385.1-201ENST00000456509 365 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC091179.1-201ENST00000461606 579 ntBASIC2.52□□□□□ -2.01
CDX4O14627 RN7SL442P-201ENST00000473804 320 ntBASIC2.52□□□□□ -2.01
CDX4O14627 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
CDX4O14627 RN7SKP298-201ENST00000515950 94 ntBASIC2.52□□□□□ -2.01
CDX4O14627 Y_RNA.676-201ENST00000516393 96 ntBASIC2.52□□□□□ -2.01
CDX4O14627 RNA5SP291-201ENST00000517222 105 ntBASIC2.52□□□□□ -2.01
CDX4O14627 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.52□□□□□ -2.01
CDX4O14627 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX4O14627 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.52□□□□□ -2.01
CDX4O14627 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.52□□□□□ -2.01
CDX4O14627 AC016957.1-201ENST00000534895 309 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC138749.5-201ENST00000611461 208 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC091834.1-201ENST00000614543 472 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC010133.1-201ENST00000615809 842 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms