Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SNORD121B-201ENST00000458838 81 ntBASIC2.96□□□□□ -1.94
CUX2O14529 RN7SL274P-201ENST00000492268 272 ntBASIC2.96□□□□□ -1.94
CUX2O14529 RNU6-714P-201ENST00000516963 103 ntBASIC2.96□□□□□ -1.94
CUX2O14529 NBEAP1-201ENST00000554452 979 ntBASIC2.96□□□□□ -1.94
CUX2O14529 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.96□□□□□ -1.94
CUX2O14529 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.96□□□□□ -1.94
CUX2O14529 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.96□□□□□ -1.94
CUX2O14529 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.96□□□□□ -1.94
CUX2O14529 SEPT7P9-203ENST00000604116 343 ntBASIC2.96□□□□□ -1.94
CUX2O14529 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.96□□□□□ -1.94
CUX2O14529 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.96□□□□□ -1.94
CUX2O14529 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
CUX2O14529 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CUX2O14529 RNU6-584P-201ENST00000410350 95 ntBASIC2.95□□□□□ -1.94
CUX2O14529 AL953862.1-201ENST00000423016 168 ntBASIC2.95□□□□□ -1.94
CUX2O14529 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.95□□□□□ -1.94
CUX2O14529 SNRPEP7-201ENST00000438350 220 ntBASIC2.95□□□□□ -1.94
CUX2O14529 USP9YP15-201ENST00000442391 422 ntBASIC2.95□□□□□ -1.94
CUX2O14529 MTND1P31-201ENST00000449206 961 ntBASIC2.95□□□□□ -1.94
CUX2O14529 AC104563.1-201ENST00000476147 376 ntBASIC2.95□□□□□ -1.94
CUX2O14529 RPL7P18-201ENST00000478965 734 ntBASIC2.95□□□□□ -1.94
CUX2O14529 AC093281.2-201ENST00000510153 597 ntBASIC2.95□□□□□ -1.94
CUX2O14529 SCARNA1-201ENST00000517138 166 ntBASIC2.95□□□□□ -1.94
CUX2O14529 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CUX2O14529 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.95□□□□□ -1.94
CUX2O14529 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.95□□□□□ -1.94
CUX2O14529 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.95□□□□□ -1.94
CUX2O14529 AL132857.1-201ENST00000555180 708 ntBASIC2.95□□□□□ -1.94
CUX2O14529 AC004067.1-201ENST00000608733 700 ntBASIC2.95□□□□□ -1.94
CUX2O14529 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.95□□□□□ -1.94
CUX2O14529 AP003122.6-201ENST00000623831 495 ntBASIC2.95□□□□□ -1.94
CUX2O14529 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CUX2O14529 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CUX2O14529 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CUX2O14529 RNU6-289P-201ENST00000364093 107 ntBASIC2.94□□□□□ -1.94
CUX2O14529 RNU6-636P-201ENST00000384598 107 ntBASIC2.94□□□□□ -1.94
CUX2O14529 RPS3AP24-201ENST00000407896 734 ntBASIC2.94□□□□□ -1.94
CUX2O14529 MIR320C1-201ENST00000408566 88 ntBASIC2.94□□□□□ -1.94
CUX2O14529 MTCO2P8-201ENST00000412213 658 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.94□□□□□ -1.94
CUX2O14529 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.94□□□□□ -1.94
CUX2O14529 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.94□□□□□ -1.94
CUX2O14529 AC005534.2-201ENST00000431047 433 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AC109583.1-201ENST00000432156 268 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.94□□□□□ -1.94
CUX2O14529 AC090774.1-201ENST00000435925 246 ntBASIC2.94□□□□□ -1.94
CUX2O14529 USP9YP25-201ENST00000457708 443 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.94□□□□□ -1.94
CUX2O14529 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.94□□□□□ -1.94
CUX2O14529 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CUX2O14529 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.94□□□□□ -1.94
CUX2O14529 SETP2-201ENST00000553886 926 ntBASIC2.94□□□□□ -1.94
CUX2O14529 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.94□□□□□ -1.94
CUX2O14529 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.94□□□□□ -1.94
CUX2O14529 AL353997.4-201ENST00000586196 166 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.94□□□□□ -1.94
CUX2O14529 AC016597.2-201ENST00000613256 341 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AC006213.4-201ENST00000616184 634 ntBASIC2.94□□□□□ -1.94
CUX2O14529 MIR6130-201ENST00000619419 109 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AC027309.3-201ENST00000623419 351 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AL159972.1-201ENST00000625150 448 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.94□□□□□ -1.94
CUX2O14529 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CUX2O14529 TPTE2P4-201ENST00000258589 1605 ntBASIC2.94□□□□□ -1.94
CUX2O14529 AC106754.1-201ENST00000562632 1513 ntBASIC2.93□□□□□ -1.94
CUX2O14529 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
CUX2O14529 SNORA14A-201ENST00000364773 135 ntBASIC2.93□□□□□ -1.94
CUX2O14529 RNA5SP138-201ENST00000365098 114 ntBASIC2.93□□□□□ -1.94
CUX2O14529 Y_RNA.433-201ENST00000384089 102 ntBASIC2.93□□□□□ -1.94
CUX2O14529 RPL23AP29-201ENST00000397284 453 ntBASIC2.93□□□□□ -1.94
CUX2O14529 MTCYBP38-201ENST00000417160 1123 ntBASIC2.93□□□□□ -1.94
CUX2O14529 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.93□□□□□ -1.94
CUX2O14529 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.93□□□□□ -1.94
CUX2O14529 AC034244.1-201ENST00000507687 207 ntBASIC2.93□□□□□ -1.94
CUX2O14529 TPT1P8-201ENST00000510120 555 ntBASIC2.93□□□□□ -1.94
CUX2O14529 AC024589.1-201ENST00000512207 263 ntBASIC2.93□□□□□ -1.94
CUX2O14529 CYCSP2-201ENST00000558168 301 ntBASIC2.93□□□□□ -1.94
CUX2O14529 HSPE1P7-201ENST00000604681 321 ntBASIC2.93□□□□□ -1.94
CUX2O14529 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.93□□□□□ -1.94
CUX2O14529 AC245297.2-201ENST00000610119 565 ntBASIC2.93□□□□□ -1.94
CUX2O14529 AL161629.2-201ENST00000615347 275 ntBASIC2.93□□□□□ -1.94
CUX2O14529 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
CUX2O14529 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.93□□□□□ -1.94
CUX2O14529 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
CUX2O14529 CDC27P3-201ENST00000635418 1910 ntBASIC2.93□□□□□ -1.94
CUX2O14529 RNU6-60P-201ENST00000364792 103 ntBASIC2.92□□□□□ -1.94
CUX2O14529 RNU6-359P-201ENST00000365466 108 ntBASIC2.92□□□□□ -1.94
CUX2O14529 CD24P4-201ENST00000382840 243 ntBASIC2.92□□□□□ -1.94
CUX2O14529 AC234781.2-201ENST00000426370 994 ntBASIC2.92□□□□□ -1.94
CUX2O14529 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.92□□□□□ -1.94
CUX2O14529 COX7BP2-201ENST00000437976 242 ntBASIC2.92□□□□□ -1.94
CUX2O14529 MTND1P9-201ENST00000453775 944 ntBASIC2.92□□□□□ -1.94
CUX2O14529 AC147055.4-201ENST00000504399 745 ntBASIC2.92□□□□□ -1.94
CUX2O14529 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.92□□□□□ -1.94
CUX2O14529 CASP1P1-201ENST00000526345 212 ntBASIC2.92□□□□□ -1.94
CUX2O14529 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.92□□□□□ -1.94
CUX2O14529 MTCO3P24-201ENST00000572729 782 ntBASIC2.92□□□□□ -1.94
CUX2O14529 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.92□□□□□ -1.94
CUX2O14529 AL133445.2-201ENST00000611191 527 ntBASIC2.92□□□□□ -1.94
CUX2O14529 AL133216.2-202ENST00000634512 349 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms