Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SNORD23.1-201ENST00000408212 104 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.63□□□□□ -2.31
CACNA1AO00555 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.63□□□□□ -2.31
CACNA1AO00555 MIR4441-201ENST00000582623 100 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 SNRPGP15-201ENST00000600149 222 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CACNA1AO00555 AC073308.1-201ENST00000623696 305 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 MIR203B-201ENST00000636080 86 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
CACNA1AO00555 AC091812.1-201ENST00000432235 1948 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.62□□□□□ -2.31
CACNA1AO00555 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CACNA1AO00555 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
CACNA1AO00555 AL356379.1-201ENST00000414105 126 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.62□□□□□ -2.31
CACNA1AO00555 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.62□□□□□ -2.31
CACNA1AO00555 AL022238.1-201ENST00000442557 355 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 RNU6-711P-201ENST00000517255 106 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 SNORD84-203ENST00000584275 78 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 UBE2L4-201ENST00000587688 464 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 AL355816.1-201ENST00000607951 118 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.62□□□□□ -2.31
CACNA1AO00555 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.62□□□□□ -2.31
CACNA1AO00555 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CACNA1AO00555 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.62□□□□□ -2.31
CACNA1AO00555 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.62□□□□□ -2.31
CACNA1AO00555 AC025465.4-201ENST00000513422 638 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 AF279873.1-201ENST00000523393 313 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 AL713998.2-201ENST00000604538 1198 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 RNA5SP108-201ENST00000605921 117 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 AC091304.6-201ENST00000619761 202 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 AC116563.2-201ENST00000624751 535 ntBASIC0.62□□□□□ -2.31
CACNA1AO00555 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.62□□□□□ -2.31
CACNA1AO00555 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.61□□□□□ -2.31
CACNA1AO00555 AL390862.1-201ENST00000635467 1469 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CACNA1AO00555 Y_RNA.181-201ENST00000363872 101 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 SNORA14A-201ENST00000364773 135 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.61□□□□□ -2.31
CACNA1AO00555 MTND4LP21-201ENST00000415303 295 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 SPINT5P-201ENST00000448174 155 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 PMCHL2-203ENST00000457791 237 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 COL6A4P2-205ENST00000509855 506 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 CASP1P1-201ENST00000526345 212 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.61□□□□□ -2.31
CACNA1AO00555 AC009712.1-201ENST00000564938 316 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 VN1R84P-201ENST00000593697 235 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 AC139769.3-201ENST00000618383 175 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 AC006249.1-201ENST00000621223 471 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 USP9YP21-201ENST00000420603 432 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 AC244098.2-201ENST00000422068 99 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 MTATP6P22-201ENST00000507369 598 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.61□□□□□ -2.31
CACNA1AO00555 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.61□□□□□ -2.31
CACNA1AO00555 AC006065.5-201ENST00000623427 349 ntBASIC0.61□□□□□ -2.31
CACNA1AO00555 CD24P4-201ENST00000382840 243 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.6□□□□□ -2.31
CACNA1AO00555 ELOCP6-201ENST00000429066 328 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.6□□□□□ -2.31
CACNA1AO00555 HMGN2P16-201ENST00000456802 261 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 ELOCP12-201ENST00000458706 328 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 LARP7P4-201ENST00000481075 878 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.6□□□□□ -2.31
CACNA1AO00555 BNIP3P31-201ENST00000604515 566 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AC004241.3-201ENST00000611728 517 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.6□□□□□ -2.31
CACNA1AO00555 AL357075.2-201ENST00000614906 189 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AL589935.2-201ENST00000616471 1231 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 uc_338.9-201ENST00000617424 182 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CACNA1AO00555 RNU4-42P-201ENST00000364738 142 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CACNA1AO00555 RN7SKP61-201ENST00000410642 295 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AL591043.1-201ENST00000432461 424 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.6□□□□□ -2.31
CACNA1AO00555 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.6□□□□□ -2.31
CACNA1AO00555 AC074198.2-201ENST00000508153 258 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.6□□□□□ -2.31
CACNA1AO00555 MIR5190-201ENST00000581537 80 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AC034236.3-201ENST00000605999 461 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 AP003122.6-201ENST00000623831 495 ntBASIC0.6□□□□□ -2.31
CACNA1AO00555 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CACNA1AO00555 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 RNU6-50P-201ENST00000362356 103 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 MIR92A2-201ENST00000385299 75 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 AL356867.1-201ENST00000429623 299 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 NCOR1P1-202ENST00000486162 291 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 AC098862.1-201ENST00000504991 413 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CACNA1AO00555 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CACNA1AO00555 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.59□□□□□ -2.31
CACNA1AO00555 AC022662.1-201ENST00000580252 331 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 AC004832.4-201ENST00000608952 331 ntBASIC0.59□□□□□ -2.31
CACNA1AO00555 U8.3-201ENST00000363321 132 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 Y_RNA.616-201ENST00000410835 95 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 MTATP6P4-201ENST00000427725 675 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms